Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1901 |
Symbol | |
ID | 3742744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1821002 |
End bp | 1821883 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637772096 |
Product | HEAT repeat-containing PBS lyase |
Protein accession | YP_377902 |
Protein GI | 78185467 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTCCG AAATACCGAA TGGTGAACTG CTGAGTGAAG ATGAGGCACT GGATTTAGCG TCTCATCTCA AAGAGAAATT GAAAGCGGGA TTGGCGATCG AGTCAGATCC AAATTCAATT TCGTTGATGG TAGCTGGACT CGGTGATCCA CGAGGTCTAC TACGCCTTCG GTTTGCAGAC AGCCTTGGCT CGATTGGGAA GGTCGCTGTC CCTGCTCTAT GCCAGGCGAT GAGAAAGAGT GACCAAGTCA CCGTCAGAAG AGCCGCAGCA AAGACGCTGA CATTAATTGC AGATCCATCA AGCTTGCCAG ACCTTGTTGC GGCTCTTCTC TCAGATCCTG ATTCCGTTGT TCAAGGATCC GCTATGGGAG CAATGGCTGC TATTGGAGCA GAAGCGGTAG GAGAAATCCT AGCAATATTG GAAAATCCTG AAAGCTCAGA GATGCAAATA GGGCTGGCAA ATTGGGCTCT GGCATTTATT GGAGATCGCG CCCCTGATAC ACTTCGCGAG GCTGCATGTT CAGACAATAA TCGTATTCGC AAAGCCGCAA TTTCGGCCCT TGGAAGTCAA ATACAATCCC TCGATGACGA TCAAGCAAAG GAATTACTCA CCAATGCATT GGGCGACCCT TGTTCAGAAA TTCGTTCTGA AGCGGCAACT TTATTAGGCA AACTCGAAGA TTCTGAATGG GCCGAACCAC TACTTATTCC AGCCTTATCC GACCCTGACA ATTGGGTTCG AAAAAATAGT GCTCTGGCGC TAATGAAGTT AGGCGCTATT AATTCGATTC CACACCTAAA GGGCCGGATC GCAATTGAAA ACGATCAAAT TATTCGCAAC GTACTAGATC TTTCGATCAA CCAGTTGGAA AAAATGAAGT AG
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Protein sequence | MESEIPNGEL LSEDEALDLA SHLKEKLKAG LAIESDPNSI SLMVAGLGDP RGLLRLRFAD SLGSIGKVAV PALCQAMRKS DQVTVRRAAA KTLTLIADPS SLPDLVAALL SDPDSVVQGS AMGAMAAIGA EAVGEILAIL ENPESSEMQI GLANWALAFI GDRAPDTLRE AACSDNNRIR KAAISALGSQ IQSLDDDQAK ELLTNALGDP CSEIRSEAAT LLGKLEDSEW AEPLLIPALS DPDNWVRKNS ALALMKLGAI NSIPHLKGRI AIENDQIIRN VLDLSINQLE KMK
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