Gene Syncc9902_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1901 
Symbol 
ID3742744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1821002 
End bp1821883 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content47% 
IMG OID637772096 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_377902 
Protein GI78185467 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTCCG AAATACCGAA TGGTGAACTG CTGAGTGAAG ATGAGGCACT GGATTTAGCG 
TCTCATCTCA AAGAGAAATT GAAAGCGGGA TTGGCGATCG AGTCAGATCC AAATTCAATT
TCGTTGATGG TAGCTGGACT CGGTGATCCA CGAGGTCTAC TACGCCTTCG GTTTGCAGAC
AGCCTTGGCT CGATTGGGAA GGTCGCTGTC CCTGCTCTAT GCCAGGCGAT GAGAAAGAGT
GACCAAGTCA CCGTCAGAAG AGCCGCAGCA AAGACGCTGA CATTAATTGC AGATCCATCA
AGCTTGCCAG ACCTTGTTGC GGCTCTTCTC TCAGATCCTG ATTCCGTTGT TCAAGGATCC
GCTATGGGAG CAATGGCTGC TATTGGAGCA GAAGCGGTAG GAGAAATCCT AGCAATATTG
GAAAATCCTG AAAGCTCAGA GATGCAAATA GGGCTGGCAA ATTGGGCTCT GGCATTTATT
GGAGATCGCG CCCCTGATAC ACTTCGCGAG GCTGCATGTT CAGACAATAA TCGTATTCGC
AAAGCCGCAA TTTCGGCCCT TGGAAGTCAA ATACAATCCC TCGATGACGA TCAAGCAAAG
GAATTACTCA CCAATGCATT GGGCGACCCT TGTTCAGAAA TTCGTTCTGA AGCGGCAACT
TTATTAGGCA AACTCGAAGA TTCTGAATGG GCCGAACCAC TACTTATTCC AGCCTTATCC
GACCCTGACA ATTGGGTTCG AAAAAATAGT GCTCTGGCGC TAATGAAGTT AGGCGCTATT
AATTCGATTC CACACCTAAA GGGCCGGATC GCAATTGAAA ACGATCAAAT TATTCGCAAC
GTACTAGATC TTTCGATCAA CCAGTTGGAA AAAATGAAGT AG
 
Protein sequence
MESEIPNGEL LSEDEALDLA SHLKEKLKAG LAIESDPNSI SLMVAGLGDP RGLLRLRFAD 
SLGSIGKVAV PALCQAMRKS DQVTVRRAAA KTLTLIADPS SLPDLVAALL SDPDSVVQGS
AMGAMAAIGA EAVGEILAIL ENPESSEMQI GLANWALAFI GDRAPDTLRE AACSDNNRIR
KAAISALGSQ IQSLDDDQAK ELLTNALGDP CSEIRSEAAT LLGKLEDSEW AEPLLIPALS
DPDNWVRKNS ALALMKLGAI NSIPHLKGRI AIENDQIIRN VLDLSINQLE KMK