Gene Syncc9902_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1857 
Symbol 
ID3742170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1787121 
End bp1787729 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content58% 
IMG OID637772052 
Producthypothetical protein 
Protein accessionYP_377858 
Protein GI78185423 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.234672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTGC CTAGAAGTCC GTTGGTGCTC TCTGGGGCGG CAGTAGCGCG GCGTTTGCAA 
GCCTCTGAAG CGGTCATCAT TCCGACGGAT ACGTTGCCGG GTTTGGCTGT TTTGCCCCAG
AACGCCAACA CCATATGGAC GCTGAAGCAG CGGCCAGCTG ATAAGCCACT GATTTTGATG
GGGGCCACGG TTGAGGCGTT GTTAGAGGGT GTCGATTCCT GTTGTCATGA CGACGCCAAA
ACCATGGCAA CCAAGCATTG GCCTGGTGCA ATCACGCTGG TTTTGCCGGC TCGGGGAATT
TATGTGGACT ACCTCAATCC CGGTGGATCC AACATTGGTT GTCGGATCCC AGCCTGTGCG
ATCACCCAGA ATCTCCTTTC AATCAGCGGT CCGCTCGCGA CCAGTAGTGC CAATCCTTCT
GGTCAGTCAG CTGCCACGAC GGCCTTTGAA GCGGCTGAGC TCTTTCCTGA TCTCGCGCAG
CTCGGACCTC AACCTTGGCC AAGGCATTCC GGGCAGGCCA GCACCGTGTT GATCTGGAGG
AGTGTTGGCT GTTGGCGCAT TGCTCGCCGT GGTGCTGTGA TGCCGGAGGG CATCAATGCA
GCGGAATGA
 
Protein sequence
MTVPRSPLVL SGAAVARRLQ ASEAVIIPTD TLPGLAVLPQ NANTIWTLKQ RPADKPLILM 
GATVEALLEG VDSCCHDDAK TMATKHWPGA ITLVLPARGI YVDYLNPGGS NIGCRIPACA
ITQNLLSISG PLATSSANPS GQSAATTAFE AAELFPDLAQ LGPQPWPRHS GQASTVLIWR
SVGCWRIARR GAVMPEGINA AE