Gene Syncc9902_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1825 
Symbol 
ID3742922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1748666 
End bp1749859 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content57% 
IMG OID637772017 
ProductATPase 
Protein accessionYP_377826 
Protein GI78185391 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCAGGCG TCCGTTTCGA AGCTCTCAGT AAGACCTACC CCGGACGACG CGGCGAAACA 
CCAGTTGAGG TGTTGCGACA ACTCGATCTA ACAATCAAAG ATGGTGAATT CCTCGTTCTT
GTTGGGCCAT CAGGTTGTGG CAAGAGCACA CTTCTGCGCT TACTGGCTGG TTTAGATCGC
CCCACCTCCG GTGAAATCCT GATTGGTGAT CGACCGGTCA GCCGCATCCG ACCCGCGCAG
CGCGACGTGG CCATGGTGTT CCAGAGCTAT GCGCTTTATC CCCACCTCAG CGTGCGAGAC
AACCTGAGTT TTGGATTACG CCGAAGCCAA ACACGCTCGC CCTGGCAGCA ACTGCACGAC
CAATTCAGTC GAGCATCGCG ACGCTTGCCG CAAGCACTCA GAATCCAATC CACCAGGGAA
CAACAGATCG CTGAGCAAAT TCAAACGGTG GCCAAGGCTC TCGAGTTGGA ACCACTCTTG
GATCGGCTAC CGAAAGAATT ATCAGGCGGC CAAAAACAAC GCGTCGCCTT GGGCCGCGCC
ATGGCTCGGA AACCTGCGGT GTTCCTAATG GATGAGCCGC TCAGCAACCT CGACGCAAAG
CTCCGGAACA GCACGCGTAC CCGCATTGTT GATCTCCAAC GGACCTTGGG CACCACCACG
GTGTACGTCA CCCACGATCA AGTGGAAGCG ATGACGATGG GCCACCGAAT TGCAGTTTTG
AACGCAGGAA AGCTCCAACA ATTGGGAACC CCGATGGAGC TCTACAACTG GCCGTCCAAT
TTGTTTGTCG CGCAGTTCAT CGGAAGTCCA CCGATGGCGC TTCTGCCTGT ATGCGTAGGG
CCGAACGCAA CCCTCCTGCT CGGGGATCGA CGGCTTGCGA TTGAGGGACC TTTGGTTCAG
GCTCTCGCCA GCCTTGAAGG ACAGCAGCTC ACTGCAGGGC TGAGGCCAGA GGGATGGATC
ATGGCTCCGG CCACAAACCG GAATTTGGCC GCAGAAGTCA GCCATTGCGA AGTGCTGGGC
AATGAGCAGG TGCTCACCTG TCGATTGCTG GACGGAGATC ACTTAATCCA AGTGCGCACG
CCACCAGAGC CCCTCTATCA GCCAAAACAA ATGGTGTATC TCGCACCAGA CCCGCGCGGT
TGGAGGTTGT TTGATGAACT CGGCAACGCT GTTGCCATGC CAGACACGAA CTAA
 
Protein sequence
MSGVRFEALS KTYPGRRGET PVEVLRQLDL TIKDGEFLVL VGPSGCGKST LLRLLAGLDR 
PTSGEILIGD RPVSRIRPAQ RDVAMVFQSY ALYPHLSVRD NLSFGLRRSQ TRSPWQQLHD
QFSRASRRLP QALRIQSTRE QQIAEQIQTV AKALELEPLL DRLPKELSGG QKQRVALGRA
MARKPAVFLM DEPLSNLDAK LRNSTRTRIV DLQRTLGTTT VYVTHDQVEA MTMGHRIAVL
NAGKLQQLGT PMELYNWPSN LFVAQFIGSP PMALLPVCVG PNATLLLGDR RLAIEGPLVQ
ALASLEGQQL TAGLRPEGWI MAPATNRNLA AEVSHCEVLG NEQVLTCRLL DGDHLIQVRT
PPEPLYQPKQ MVYLAPDPRG WRLFDELGNA VAMPDTN