Gene Syncc9902_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1758 
Symbol 
ID3742168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp1689979 
End bp1690635 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content56% 
IMG OID637771949 
Productriboflavin synthase subunit alpha 
Protein accessionYP_377759 
Protein GI78185324 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACTG GCCTTGTGCA GTCGGTTGGA ACCATTCAGC GTCGTTCAGG GGCTGTGGTG 
GTGTCGGGTT GTTCGCCATT TGCGCCCCTT GTATTAGGCG ACAGTGTTGC GGTGGATGGG 
GTGTGCCTCA CGGTTGCTGA GTTAGTGGCC GACGGCTTTC GTGCTGATGT CAGTGAAGAG 
ACACTGCGCC GAACCACCCT TGGCCGCAAG TCGGAACAAG GCGGATCCGT CAATTTGGAA 
CCTGCGCTCC GTCTCAGTGA TCGCCTTGGC GGTCATTTGG TGAGTGGTCA CGTTGATGCT 
CCAGGTGAGG TGATTCGCTT GGAGGCTTTG CCTCAGTCTT GGCTCTTGGA AATGCGTTGG 
CTGGAGCCGC GATTCGGTCG TTATGTCTGT GAGAAAGCGA GTATCGCCGT GGATGGCATC 
AGTCTCACCG TCGCGGACTG TTGCCCAGAA GGGGTGACGT TTTCATTGGC GGTGATTCCG 
CACACTTGGC AAGAAACCAC CCTGCGGGGA TTGGCCGTAG GCGATCGTGT GAATCTTGAG 
GTGGATCAAC TGGCGCGTTA TGCCGAGCGA TTGTTGATCG ATTCTCCGAA GCAGACTTAC 
GCCAAGCCTG TTTCGGACTT GTCGGTGGAT TGGTTGGCCT CCAATGGCTG GTCTTGA
 
Protein sequence
MFTGLVQSVG TIQRRSGAVV VSGCSPFAPL VLGDSVAVDG VCLTVAELVA DGFRADVSEE 
TLRRTTLGRK SEQGGSVNLE PALRLSDRLG GHLVSGHVDA PGEVIRLEAL PQSWLLEMRW 
LEPRFGRYVC EKASIAVDGI SLTVADCCPE GVTFSLAVIP HTWQETTLRG LAVGDRVNLE 
VDQLARYAER LLIDSPKQTY AKPVSDLSVD WLASNGWS