| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1755 |
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| Symbol | |
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| ID | 3742165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1687272 |
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| End bp | 1688942 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637771946 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_377756 |
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| Protein GI | 78185321 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.900369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTCA CACTTCCTCC CAACAGCACG GCCCCAGCCC CAAAACTTCA GCCCACGGGC
TGGTTGCGGT ACTTCAGTTT CAGCGTTGAT CACAAAGTGA TTGGCCTGCA ATATCTCGTC
TGCGGGTTTG TTTTTTACCT GATCGGTGGA GCTCTCGCTG GAGCCATCCG CACAGAACTG
GCCAGCCCCG TCGCCGACTT CATGGCTCGG GACGTCTACA ACCAAGTGCT CACCTTGCAT
GGCACGGTGA TGATTTTTCT TTGGATCGTT CCTGTGGTGA ACGGCGCCTT TGGAAACTAT
TTGATCCCGT TTTATGTGGG TGCTCGGGAC ATGGCTTTCC CACGGCTGAA TGCCGTTGCT
TTTTGGCTGA TTCCACCTGC TGGCCTGATG TTGGTGGCCA GCTATTTCAT CACTGGAGCT
GCCCAATCAG GCTGGACTGC TTATCCACCC CTCAGCATTA CAACACCTGC TACTGGGCAA
ATCATATGGA TCGTCAGTGT TCTTTTGTTA GGCGGCAGTT CAATTTTCGG TGGCATTAAT
TTCATCGCCA CAATTCTGAA ATTGCGTCGC CCAGGGCTCA AGTTGATGCA GATGCCGATG
TACTGCTGGG CGATGCTTGG GACCAGCATC CTGGTTGTCG CATCAACCCC TGTTCTTGCC
GGAACATTAG TTCTTTTAAG TTTTGATATT GTTGCGCATA CCGGATTTTT CAATCCATCA
CTTGGCGGGA ATGTTGTTGT TTATCAACAC TTGTTCTGGT TCTATTCACA CCCAGCCGTT
TACATCATGG TTTTACCAGC TTTTGGGCTG GTTAGTGAAA TCCTTCCGAT TCATGCTCGC
AAGCCACTAT TTGGCTATGT GACGATGGTC TACTCAATCA TGGCCATCGT TGTTCTCGGC
TTGATTGTTT GGGCACACCA CATGTTCACC AGTGGAACAC CACCCTGGAT GCGCTTATTT
TTTACAATTG CCACGGCATT TATTGCTGTT CCAACAGGAA TCAAATTTTT TAATTGGCTC
GCCACCTTGT GGGGCGGCAA AATCAGCTTG AACAGCGCGG TTCTCTTCTC CTGCGGATTC
ATCGTGAATT TCGTGCTCGG AGGTATCACT GGAGTTGCCT TAGCGCAGGT GCCTTTCGAT
ATTCATGTGC ATGACACTTA CTTCGTCGTA GCCCACTTCC ATTACATCGT TTTTGGAGGA
TCTGTTTTTG TCATTTTCGC CTCGATCTAT CACTGGTATC CCAAGTTCAC AGGGCGCATG
CTGAATGAAG ATTTGGGACG CTTCCACTGC GCTCTCACGT TCATTGGCTT CAACTTTTGT
TTTGGACCTC AGCACTGGCT TGGTCTCAAT GGAATGCCAA GACGGGTTGC GGAATACGAC
CCTCAGTTCA CTTTGATCAA TCAGATCAGC TCCGTGGGCG CGTTGCTGAT GGCCATCAGC
ACCCTGCCCT TCCTGTGGAA CGTGATTCAC AGTGCTTTTT ATGGAAAGGT CGCTGGAGAT
AATCCATGGA ATGCACTCAC GCCGGAATGG CTGACCAGTT CCCCCCCTCC AGTGGAGAAC
TGGGTGGGAG AAGCACCTCT GGTGAAAGAG CCCTATGCCT ATGGCGTCCC CGTCGATGAA
ATCGACTTGT CCGCTACGAG CGGGCGTGAT CTTTGGAGCA GTGGCAAATG A
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| Protein sequence | MTVTLPPNST APAPKLQPTG WLRYFSFSVD HKVIGLQYLV CGFVFYLIGG ALAGAIRTEL
ASPVADFMAR DVYNQVLTLH GTVMIFLWIV PVVNGAFGNY LIPFYVGARD MAFPRLNAVA
FWLIPPAGLM LVASYFITGA AQSGWTAYPP LSITTPATGQ IIWIVSVLLL GGSSIFGGIN
FIATILKLRR PGLKLMQMPM YCWAMLGTSI LVVASTPVLA GTLVLLSFDI VAHTGFFNPS
LGGNVVVYQH LFWFYSHPAV YIMVLPAFGL VSEILPIHAR KPLFGYVTMV YSIMAIVVLG
LIVWAHHMFT SGTPPWMRLF FTIATAFIAV PTGIKFFNWL ATLWGGKISL NSAVLFSCGF
IVNFVLGGIT GVALAQVPFD IHVHDTYFVV AHFHYIVFGG SVFVIFASIY HWYPKFTGRM
LNEDLGRFHC ALTFIGFNFC FGPQHWLGLN GMPRRVAEYD PQFTLINQIS SVGALLMAIS
TLPFLWNVIH SAFYGKVAGD NPWNALTPEW LTSSPPPVEN WVGEAPLVKE PYAYGVPVDE
IDLSATSGRD LWSSGK
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