Gene Syncc9902_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1750 
Symbol 
ID3742160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1682412 
End bp1683245 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content52% 
IMG OID637771941 
Productputative multidrug efflux ABC transporter 
Protein accessionYP_377751 
Protein GI78185316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0190039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCCGT CAGCCAATTC TCCTGGCGCA CTGGCAGAGC TCACCCAAGA AACCCTTGCC 
CTAACGCGCC GGCTGTTTCT TCAACTTGTT CGTCGTCCAT CCACCTTGGT GGCTGGTGTT
TTGCAGCCAT TGATCTGGTT GATTTTGTTT GGAGCTTTGT TTGCGAATGC TCCAGAGGGC
CTACTCCCGG GTGGGATGAG CTACGGACGT TTTCTTGGTG CGGGAGTGAT CGTCTTTACC
GCTTTTAGTG GTGCACTCAA TGCTGGGCTC CCTGTGATGT TTGATCGGGA GTTTGGTTTT
TTGAATCGAC TGCTCGTGGC GCCATTACGC AGTCGAAGTT CCATTGTTTT GTCGTCGGTG
ATTTACATCA CGGCATTGAG TTTGGTGCAG AGTTTGGCGA TCATGATTAC CGCCTCACTG
CTTGGGTATG GCTGGCCTGG TGCGGCTGGT TTGGTGCTGG TGATGGCCAC ACTGTTGCTC
CTTGTATTTG CCGTAACAGC GTTGAGTCTT GGCCTGGCAT TCGCTCTTCC AGGACACATT
GAACTGATCG CGGTGATCTT TGTCGCGAAT CTTCCTTTGT TGTTTGCAAG CACGGCTTTA
GCTCCCTTGT CGTTTATGCC TGCCTGGTTG GGCTGGCTAG CAGCCCTAAA TCCCCTTACC
TTCGCAATAG AGCCCATACG TGCTGCTTAC AGCGGCCCCC TCGATCTTTC GGCAGTTTTA
CTCGAGGCTC CCTACGGGAA TCTCACAGGT AAAACATGCC TTTTGGTTTT GTTGGTTCTC
ACTATTGGGT TGTTTCTTTT GATCCGCCCG CTCCTTAACC GCAAGCTTTC CTGA
 
Protein sequence
MPPSANSPGA LAELTQETLA LTRRLFLQLV RRPSTLVAGV LQPLIWLILF GALFANAPEG 
LLPGGMSYGR FLGAGVIVFT AFSGALNAGL PVMFDREFGF LNRLLVAPLR SRSSIVLSSV
IYITALSLVQ SLAIMITASL LGYGWPGAAG LVLVMATLLL LVFAVTALSL GLAFALPGHI
ELIAVIFVAN LPLLFASTAL APLSFMPAWL GWLAALNPLT FAIEPIRAAY SGPLDLSAVL
LEAPYGNLTG KTCLLVLLVL TIGLFLLIRP LLNRKLS