Gene Syncc9902_1732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1732 
Symbol 
ID3742965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1666478 
End bp1667281 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content59% 
IMG OID637771923 
ProductSec-independent periplasmic protein translocase 
Protein accessionYP_377733 
Protein GI78185298 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0805] Sec-independent protein secretion pathway component TatC 
TIGRFAM ID[TIGR00945] Twin arginine targeting (Tat) protein translocase TatC 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTGAAC GCCTCGACGG TCCCCCAGCC CTTCAACCCC CTCCGCCGAT CCGCATTGGT 
CGAGGGCCAG ACGATGCCGA CCTACCCCAT GAGGTGGAAA TGCCTCTCAT GGAGCATTTG
GAAGAACTGC GCGGACGGGT TCTCAAGAGT TTGCTGGCCG TGGTCATCGG AGCAGCGCTT
TGTCTAGTCG GTGTGAAACC CCTGGTTCGC CTGCTGGAAG CACCAGCAAA GGGAATTCAC
TTCCTGCAAC TCGCGCCTGG GGAGTTCCTG TTCGTCTCGT TGAAAGTGGC TGGCTATGCC
GGCCTCACCC TGGCCTTGCC CTACGTGCTG TTCCAGTTAT TGGCATTTGT GCTGCCAGGT
CTCACTGTGC GGGAACGGCG CTTAATCGCT CCGGCCGTTG CTGGCTCAGC CGTGTTGTTT
TTAGTTGGTC TCACCTTTGC CTGGTGGGCC CTGGTTCCAG CGGCACTGAA CTTCTTGGTG
AGCTACGGGG CTGACGTGGT GGAACCGCTT TGGTCGATTG AGCGTTACCT GGATTTCGTT
TTACTGCTGA TGTTGGCCAC AGGACTGGCC TTTCAACTGC CAGTGCTGCA GCTCCTTCTT
GGCGTTCTTG GACTCGTCCG CTGGCGTTCG ATGCTCGGGG CTTGGCGCTG GGTCGTACTG
GGTTCAGCAC TGGCGGGAGC GGTGCTCACC CCATCCACCG ACCCGATCAC CATGTTGCTG
TTGGCCAGTG CAATCACGGG ACTTTTTGTT GTGGGAGTCG GGCTTGTCGC CTTGACCGAA
CAACTCAAAC CAGAAACTCC TTGA
 
Protein sequence
MPERLDGPPA LQPPPPIRIG RGPDDADLPH EVEMPLMEHL EELRGRVLKS LLAVVIGAAL 
CLVGVKPLVR LLEAPAKGIH FLQLAPGEFL FVSLKVAGYA GLTLALPYVL FQLLAFVLPG
LTVRERRLIA PAVAGSAVLF LVGLTFAWWA LVPAALNFLV SYGADVVEPL WSIERYLDFV
LLLMLATGLA FQLPVLQLLL GVLGLVRWRS MLGAWRWVVL GSALAGAVLT PSTDPITMLL
LASAITGLFV VGVGLVALTE QLKPETP