| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1724 |
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| Symbol | |
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| ID | 3742958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1660890 |
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| End bp | 1662008 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637771916 |
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| Product | pilus retraction protein PilT |
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| Protein accession | YP_377726 |
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| Protein GI | 78185291 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATCAGC CGGTCTTTCC CCCCAGCTTT CCGCCGCGCA CAGCCGGCAC CTCAGCCAGT
ACCCCATCTC CAACAACGCC CTCACCGGAG GTGCGGGGGG GAACAGGCTC CCTATCCCTG
GAAGCCATCC TGCGCACCGC CCATGACGCA GGACATTCGG ATGTCCATCT TGGTGTGGGG
GAGCGTCCAC GCTTTCGCGC GCGTGGCGAG ATTCAAACCA CCGATTGGCC CGCCACCGAT
GACAGGGTGT TTCAAGGATG GCTCCGTGAA ATTCTCTCTC CGCAGCAAAT CGATTCGTTT
TATCGCGACA AAGAACTCGA CAGCGCCTTT GCCTTTCCCT TCGTGCGCGT GCGGATCAAT
TTGCTCGACT CATTGCGTGG CCCAGCGATG GTGCTGAGGC TCATCCCTCA AACCATCCTC
AGCTTGGAGC AGCTCAACCT TCCAGAGGTT CTCAAGGATC TGGCAGCCCG CCCCAAAGGA
CTCGTTCTAA TTACAGGGCC GACTGGGTCT GGGAAAAGCA CAACCTTGGC CGCGATGATC
GATTGGATCA ACCGCAATAA AACCTGCCAC ATCCTCACCA TCGAAGATCC GGTGGAATTT
GTGCATGAAA GTCAAAAGTC CCTGATTCGT CACCGCGAAG TGGGTTTAAA CACCCTGAAG
TTCCATCACG CCTTACGAGC AGCCCTGCGG GAAGATCCAG ATGTGATCTT GGTGGGAGAA
ATCCGAGACC AGGAGACCCT CTCAACAGCG CTTGAAGCAG CTCAAACCGG TCACCTGGTA
TTCGGAACGT TGCACACCAA TTCGGCGGTC AAAACCGTCG AACGGGTGCT CGGAATGTAT
GCACCTGACG AACAACCCAG CGTCCGCCGA TCACTCTCTG AATCCTTATT AGGTGTCATT
TCTCAGGGGT TGATTCGCAC CAACGACGAG AAGCGCGCTG CTTATCAAAA ATCCTCGTCA
ACACAGATGC CTGCCGGGAT TACATCCAGC GAGGCTCCCT GGACGAGGTC GAGGAAATCA
TGGCGCGTAG CAGCTTCGAT GGAATGGTCA CATCGAATCA ATCGCTTCAA GCGCTTGTCG
AAACGGGACG GGTCGAATCA GAACAGGCAA TTGCCGTGA
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| Protein sequence | MDQPVFPPSF PPRTAGTSAS TPSPTTPSPE VRGGTGSLSL EAILRTAHDA GHSDVHLGVG
ERPRFRARGE IQTTDWPATD DRVFQGWLRE ILSPQQIDSF YRDKELDSAF AFPFVRVRIN
LLDSLRGPAM VLRLIPQTIL SLEQLNLPEV LKDLAARPKG LVLITGPTGS GKSTTLAAMI
DWINRNKTCH ILTIEDPVEF VHESQKSLIR HREVGLNTLK FHHALRAALR EDPDVILVGE
IRDQETLSTA LEAAQTGHLV FGTLHTNSAV KTVERVLGMY APDEQPSVRR SLSESLLGVI
SQGLIRTNDE KRAAYQKSSS TQMPAGITSS EAPWTRSRKS WRVAASMEWS HRINRFKRLS
KRDGSNQNRQ LP
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