Gene Syncc9902_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1558 
Symbol 
ID3742301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp1507171 
End bp1507713 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content39% 
IMG OID637771747 
Producthypothetical protein 
Protein accessionYP_377560 
Protein GI78185125 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.280384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAA ATACCTCGCA GAACAGAAGG AATCGCATTG AAGCAAACTT TGAAAGATGG 
CTATGGCGCT TCAGGCTGAT CAGTATTATT CCCGTTTTAA TGAGCCTTTT AGGAAGCATA 
AGCTGTTTTA TTTTAGGAAC ACAGGAAGAA TTATCGGCAC TGCATAAACT CTTTAATGGG 
CACTTCGATT CTGATAAAAG CATCCTCCTT CTTGGCAAAG TCGTAGGAGG AATTGATTAC 
TATGTGATTG GAATAGCATT GCTTATTTTC GGCTACGGTG TCTACGAATT AATTATCTCT 
GATATCGACC CTCGCTTACA AGACTTAACT GACGACAGAA GAAATATTCT TAGTATCAAT 
TCGCTCGAAA GCCTCAAACA AAAACTGACC AATGTCATTA TCGTTGCCTT AATTGTAACG 
GCATTTAAGT TAATGATTAG CTTTGAGGTC GATTCAATTG TTGAGGTTTT TCAGTACTGC 
GGATGCGTTC TAATGCTTTC ATTTAGTGCT TGGCTCGTCG GCCAGAATAA CAACAACCAT 
TGA
 
Protein sequence
MNTNTSQNRR NRIEANFERW LWRFRLISII PVLMSLLGSI SCFILGTQEE LSALHKLFNG 
HFDSDKSILL LGKVVGGIDY YVIGIALLIF GYGVYELIIS DIDPRLQDLT DDRRNILSIN 
SLESLKQKLT NVIIVALIVT AFKLMISFEV DSIVEVFQYC GCVLMLSFSA WLVGQNNNNH