| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1546 |
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| Symbol | |
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| ID | 3742289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1496024 |
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| End bp | 1497226 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637771734 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_377548 |
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| Protein GI | 78185113 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.271774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTATC CCGCTCCACC TCGCAGCGCC TACCTCCACA TTCCCTTCTG CCACCGTCGC
TGTTACTACT GCGACTTTGC TGTTGTTCCC CTCGGAGATC GGGCCCGCGG TGGCCAGGGA
CCAGGGAGTG CTTCGATCCA AAGTTATCTC CAGGTCTTGC ATCACGAGAT CGCTTCTGCG
CCAAAGGGTC CACCGCTTTC AACGGTGTAC TTCGGTGGCG GAACTCCATC GCTTTTAAGC
CCAGCTCAGA TCGCCGAGTT ACTGGGTCAG CTTCGGTTGC GTTATGGCCT GCAAGAAGGT
GCGGAAATCA CCCTGGAGAT GGATCCCGCC AGTTTTGATC AGCATCAGCT GAAGGAAGTT
TTGGCCTTTG GGGTGAATCG GATCAGTCTT GGAGGGCAAA GTTTTGACGA TGGGGTCTTG
GAACAATTGG GTCGACGCCA TCGCTCCAAG GATCTTTTAG AGGCCTGCGA ATGGATGGAC
GATGCCCATC GGTCTGGTGA ACTGAGCTCC TGGAGCTTGG ATTTGATTCA GAGCCTCCCT
GGGCAGACCC TTGAGGACTG GTGCCATCAA TTGAATCAGG CCATCGCCTG TGGATCGCCT
CATATCTCGA TCTACGACCT TTCTGTTGAA CCTGGAACCG TTTTCCACCA CAGGCTTCAT
CACGGTGACC TGACCTTGCC CGACGACGAT GTTTCGTGCG ATCTGATGGC ACTGACATCC
TCGCGCCTAT CCGAAGCGGG TTTTCGCCGC TACGAAATTT CGAACCATGC AAGACCTGGC
CATGCATCGC GGCACAACCG GGTGTATTGG AGCGGATCCG GTTGGTGGGG ATTTGGCATG
GGGGCAACAT CCGCCCCATG GGGAGAACGC GTCGCTCGAC CGCGGACCCG TGAGGCCTAT
TCAGCGTGGT TAAACGATCC TCGCGAACCG GAGGGTGGAT TCGGAGTGCC CCTCGATGAG
CAGCTGCTGG TGGGCTTGCG GCGTGAGGAG GGAATGGATT TGACTGCATT CGATCTGAGC
TCTGCTCAGA TCACATCCTT GGAAGAGCGA TGGGCTCCAT TCCTCAAAGA GGGATTGATG
CAGCGGCGTG CCGGTCGCTG GTGTTTAAAA GATCCAGAGG GGATGGCCCT CAGCAATCGG
GTTCTGCTTG AGGTGGTGCT GTGGTGGGAG AGCTGCTCTG GTGCTCCTGT ATCCAGCCCC
TGA
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| Protein sequence | MPYPAPPRSA YLHIPFCHRR CYYCDFAVVP LGDRARGGQG PGSASIQSYL QVLHHEIASA
PKGPPLSTVY FGGGTPSLLS PAQIAELLGQ LRLRYGLQEG AEITLEMDPA SFDQHQLKEV
LAFGVNRISL GGQSFDDGVL EQLGRRHRSK DLLEACEWMD DAHRSGELSS WSLDLIQSLP
GQTLEDWCHQ LNQAIACGSP HISIYDLSVE PGTVFHHRLH HGDLTLPDDD VSCDLMALTS
SRLSEAGFRR YEISNHARPG HASRHNRVYW SGSGWWGFGM GATSAPWGER VARPRTREAY
SAWLNDPREP EGGFGVPLDE QLLVGLRREE GMDLTAFDLS SAQITSLEER WAPFLKEGLM
QRRAGRWCLK DPEGMALSNR VLLEVVLWWE SCSGAPVSSP
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