| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1437 |
|---|
| Symbol | |
|---|
| ID | 3742608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1398134 |
|---|
| End bp | 1399627 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637771627 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_377445 |
|---|
| Protein GI | 78185010 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTACAT CAAGCGCAAT GCCTTATGCG TTTTTTCTAG ATACTATTAG TTCCTACACA
AATACACCAA ACGGTTCAGC AATTATAGGT GAAACTAGTT TAGCAGGACA AAAAGAGATA
AACGATAGCA AGCGTTTTTT TGGGATGAGT GCCGCTTTCA ATGGGGGTGG AGATGCCGCA
GAGACTTGGG GCTTAATTAA TAAGAAATTA AATACGATTA GCAGGCTGAG CGGAGATGCC
AAAGCATCCG CAATTGTAAA CGCAGCGTTA CTATATCCTA TCGAACTTGA TCCAAGCTTG
AATGATGGAC GGCCAGAAGA TCCAAAAAAT TGGTTTTACG CCCAAAACTT TCAAATGAAG
AATCCAGCAG ATGCTGCAGA AAATTATGCT TTAGTTACCA TAATGCTATG GGTGGCAAAT
CAGTTATATC CAAACACTAA AATCATTCCT GTCTTTGACT CCTACTATGT TAAAGGATTA
AACTTTCCGC CCTCAGGTAT TGTTGATGAA GTCAATGCAA AAATTACACC ATTAGGCATC
CCAGCACTAG AAAAAGTCAA CGATAAGCCA CCAGAGGGAA AACAATGGAA TATGCTTTCC
ACATTCTATA ATAACAAACT GATTGATGGA TGGATTGGAG ATATTTATGG AGACAAAGGC
GACACTACCG ATCTTGAGGG AAAACTTCCT ACGCCTGAAA GTCCTTTCTA TAGCAAAAAT
CCTGTACCCT ACGTATTGCA ATCAAGATCA GATTATCTAG ATCAGAAATC AAAATTACCC
ATCGGATCCG ATTATTATGA TCCCAATGGG ATAATGCCAT TCAATGCCTC AATTGATTTC
AATGGTGATC TTACAGTCCC AGTAGGTTAT TCACCATCGA GCAAGCTTAC GCCAGTACCT
AAGCCGTATT CGGCAACATC ACTTGCGCCA ATTGGTGTTC AAACCACCGA TGGATTTACA
AAATTCACTG GTTCTGAAGA CTCACTAATA GGGCAATCAG ATATCAAGTC TCGAATGATG
GGAGGAGATG ATTATCTTGA GGTAATAGGT GGCAATAATT ATGTTCATGG AAATAGGGGT
AAAGATACCA TTGTTTTGCG TGGTGGCATT GGTAAATACT TAGGAGGAAA AGGCAGCGAT
GTATTTATTG TTATTGAGAC TGAAGCAGGC ACCTTAATAA GAGCTGATCG TGGTGCGGAC
ATCATCACCG GCTCCGCCTC TGGTGTGATT TATAGGTCTG GTAAAGGCAA TGATGTGATT
TCTGTTAGTC AAGGGAAAGT GTGGGGTAAT CGTGGAAAGG ATGTATTCCG TGGAGTACCC
GGAGAAGGAT ATGCTGAAAT ACAGGACTAC ACCATTGGAG AAGATTATGT TGAGATTGCA
ATGGATGGTG TCTGGAGCAA TATTGAATCA GGCTTGATAT TTACAGGTGA TTCAGGCGAC
CAAATAATGC TGCTTGTTGG AATTAGTGAT ATTAAACAAG TGACCACGGT CTGA
|
|---|
| Protein sequence | MTTSSAMPYA FFLDTISSYT NTPNGSAIIG ETSLAGQKEI NDSKRFFGMS AAFNGGGDAA
ETWGLINKKL NTISRLSGDA KASAIVNAAL LYPIELDPSL NDGRPEDPKN WFYAQNFQMK
NPADAAENYA LVTIMLWVAN QLYPNTKIIP VFDSYYVKGL NFPPSGIVDE VNAKITPLGI
PALEKVNDKP PEGKQWNMLS TFYNNKLIDG WIGDIYGDKG DTTDLEGKLP TPESPFYSKN
PVPYVLQSRS DYLDQKSKLP IGSDYYDPNG IMPFNASIDF NGDLTVPVGY SPSSKLTPVP
KPYSATSLAP IGVQTTDGFT KFTGSEDSLI GQSDIKSRMM GGDDYLEVIG GNNYVHGNRG
KDTIVLRGGI GKYLGGKGSD VFIVIETEAG TLIRADRGAD IITGSASGVI YRSGKGNDVI
SVSQGKVWGN RGKDVFRGVP GEGYAEIQDY TIGEDYVEIA MDGVWSNIES GLIFTGDSGD
QIMLLVGISD IKQVTTV
|
|---|
| |