| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1428 |
|---|
| Symbol | |
|---|
| ID | 3742599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1391244 |
|---|
| End bp | 1392389 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637771618 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_377436 |
|---|
| Protein GI | 78185001 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3380] Predicted NAD/FAD-dependent oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.521801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATCACT ACGACCTTGT TGTTATTGGA GCCGGGCTGG GTGGATGCAG CCTCGTGGCA
TCACTCGAGA AGCTTGGATA TCAGGGTCGT GTTGCCTTAG TGGAAGCCGG ACGAGGTCCT
GGAGGACGAA CAGCCAGTCG TCGCAGTCGC ACAGATCCGC GGTGGTGCAT CAACCACGGA
GCTCCAGCGA TCAAGCTGAG TGAATCCCTT CCATCCGCCG TTGATGGATT GCTGGAACCG
CTGCGAAACG CGGGAACGCT GCAACCCGTT GTGAACCATG AGGTGGCGAT CGATGCAAAC
GGCCAAGTGG TGGCCATTGA TCCAGCATCC CCATCTACTA GCCAATGGTG GACTGGAAGA
CCCGTTATGG CGAGTGTCTG TGAGGGCTTG TTAGGGCAAA GCTCAAACAA GCTCGAAAGT
CATTTCGGAA CACGGGTGCG ATGGCTCAAA CGCCCCGCAG ACCATTGGAT GCTGTCGGAT
CAATCCGAAG GCTGGCAACT CAAGGCCAAG CGCCTCGTTC TGAGTGGCAA CTTGCTTGCC
CATCCACGGT CACTGGCGAT GCTCCAGTGG AACGATGTGC CGTTGCGAAC TGCCGTCCCT
AAAGGAGTCG ACCCTGAATT GGATGCCGTC CTTACAACAT TGGAGGCCAG TGCATCCACA
GTTCGCTGGA ACTTGATGCT CGATTTAGGT GATGTAAACC TGCAGACACC TGCGCTTCCC
TGGCAGATCG GGCTAAACCC AGATGCACAA AAGCGCTGGG GAGTAGAGCG GATCGTGCTG
CATCGCCAGA CCGATGCACG GCTTGGCTTG GTGGTTCATG GATTGCATAA CGGTGCAACG
ATCGATCCCA GCACCCAGCC GGTCTTGCTT GAGTCCGAAG AAAAGCGATT AGAAGCTGTT
TTGCCTGAAC TCCTCCTGCA TTGGCCTGCC CTTCGCAAGG CCTTGAAATC AGCACGATCG
ATGGGCGTGA TGCGCTGGGG AGCAGCACAA CCTCTGAACC ACCCCGTTCC GAGTCATTTG
CAGTGGTGCC ACCAAAGCGC CGTTGGTTTT TGCGGCGACT GGATTGAAGG CCCTCACTTC
GGAACAGGCG AAGGAGCGAT CCGCAGCGGT GTTGCTCTTG CCGAACGGCT GACCGCCGAC
AGTTAA
|
|---|
| Protein sequence | MNHYDLVVIG AGLGGCSLVA SLEKLGYQGR VALVEAGRGP GGRTASRRSR TDPRWCINHG
APAIKLSESL PSAVDGLLEP LRNAGTLQPV VNHEVAIDAN GQVVAIDPAS PSTSQWWTGR
PVMASVCEGL LGQSSNKLES HFGTRVRWLK RPADHWMLSD QSEGWQLKAK RLVLSGNLLA
HPRSLAMLQW NDVPLRTAVP KGVDPELDAV LTTLEASAST VRWNLMLDLG DVNLQTPALP
WQIGLNPDAQ KRWGVERIVL HRQTDARLGL VVHGLHNGAT IDPSTQPVLL ESEEKRLEAV
LPELLLHWPA LRKALKSARS MGVMRWGAAQ PLNHPVPSHL QWCHQSAVGF CGDWIEGPHF
GTGEGAIRSG VALAERLTAD S
|
|---|
| |