| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1410 |
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| Symbol | |
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| ID | 3742120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1374118 |
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| End bp | 1377744 |
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| Gene Length | 3627 bp |
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| Protein Length | 1208 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637771598 |
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| Product | exodeoxyribonuclease V, beta subunit RecB |
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| Protein accession | YP_377418 |
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| Protein GI | 78184983 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.828955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAC GCTTTGACGC CAACACTTAT CCCCTTAAGC CTGGAATCCG TCTGTTGGAA
GCCAGTGCAG GGACGGGCAA AACCTTCGCG CTTGCCCATC TCACCCTTCG ATTGATCACC
GAGGCGGCTT ACCCGCTGGA AGCACTGCTC GTTGTGACTT ACACCGAAGC CGCCGCTGAG
GAATTGCGAT CTCGGATTGG TCAGCGTTTG CAGCAGGCGC TAGTTGGGTT GGAGCAACTG
GAGAACGAAA TGTTTCCGTC GGCTCCCGAC CCGGTCATGG CCGCATGGTG GGAGCAATGC
ACGGCGTCTG CGGATCGACG CATCAGAATT CGACGGCTGT TGGTGGCACT CGAGCAACTC
GACCGGGCTG ACATCGCCAC GATCCATGGG TTTTGCCGCC GCAGCCTGCG CCGTTTAGCC
CTCGATAACG GGGCTGCGAT CGAACCTCAA CTCGAGAGTG ACGCGGCCGC ACTTCAGGCC
GAGGTGGTGC AATACCTCTG GCAGCAGGAG CTGTTGACCC TTCCCGATGA GCAGTTGCAA
GGGCTACGGC AACGGGGGTT GTCGCCGCAA ACGTTCGGTG CGGCTTTGGC CCGACTGGAT
GGAGATCCCA ACCCCCGGCT GGCCGGCGAT TCGACAAGTG TTGATCGACA ATCGCCGCTG
CGTGATCAGC TCCCGTGCTG GATCGAAAGC CTTTGGCATG CGTTTCAATC CCACTGGGAG
AGTGATCATG CCGCCCTGGA GTCGGGTTTT CGAGCGGCAG CTGCGCAGTG GAAATCCCAG
GGTTGTGGCT CAACATCGCC CTACAGCGCG AAGCCACGCA CGGATCGCTG CGCTGTGATC
AACCAATGGA TCGCGATCCA AAACGGTGTG CCGTCCCTGG CCGCGATTGC CTCGGTTGAG
AAACCCTTGA AGGAGTATTT CCATCCCGGC AGTTGGTGCC GGATGGCCCG GAAGTGCGGA
GAGGACGAGC CCAGTTTGGT GGCGTCGGCA CTGCAGTCCG CAATTGGTGC CCTTTGGGAT
GAGCCATTGG AACGGGTATG GCGATATTTG CTGGAGCGTG GTCTTGAGGA ATTACGGGAG
CGTCGTGGTC GTCGTGGAGC GATCACTTTC GCTGGATTAC TCGCGGCGAT GGATCCGGGT
GATGGACAGG TGGATTGGCT GGCACCGCTT CAGGAGCGCT ATCGCGCGGT GATGGTGGAT
GAGTTCCAAG ACACCGATCC GGTGCAGTGG CGTTTGCTGC GACGGGCCTT TGGTGATCGC
ATTCACCATC TTCTGCTGTT GGTGGGCGAT CCAAAGCAAG CGATTTATCG CTTTCGTGGT
GGCGATCTCG GAACCTATCT AGAGGCTCGC CAACAGGTTG ATCGCATTGA TCACTTGCTC
GATAACTTCC GCGCCACCGC ATCGCTGATG GACGGGTTGA ACACGTTGAT GGCGCCAGGC
ATGCCTCGCT CTCACTTGGA AATTCCTGCG GTGCGAGCTC AAGCCGTTGA TCAGGTGTCT
CCGACGACGG CCGCGCTACA GCTGCTTGAG CTGGAGCTGG ATACGCCTGC ATCACGAACG
GCATTGGAGC AGCAGTTGCC GCAACACCTC GCTGCGGTGG TGTTTGAAAT TTTGGAAGGC
CCCGATCAAC CCGACCCTTC TGATCTGTGT GTGCTGGTCA GTCGTCATCA ACAGGCGACG
GACCTACGTC GGGCCCTTGG CGCCGCTGGC ATTCCCAGTC GGTTGGTCAC CCAGGGCGAT
GTGTTGGAAA GCGAAGCCGC TCTAGTGGTG CAGCGCCTGT TGGATGCCCT GGCAGATCCC
GGTGATGATC GTTGTTTGCG GCTGTTGGTG AGCTCCCCGC TCATGAATTG GTCCTTAGAG
GCGATGGAGA ATGAGGGGGG GCTCGATCAG CTTGCTGAGC AGCTGCGGCT TTGGGAACGC
GCCTTGCCCA AGCTCGGTTT AATGGGATGT TTGGCCCAAC TCCTGGAGGG TCAGCGGACT
GCGGATTTGT CCGAACGGGG CCGAATGTTG GGGGACCTGC AGCAGGTGGG TCGATTGGTG
CAGGAGGCAA TGCATCGGCA GGGATTGGAC AGTGCAACGG CAGCAAATTG GCTGCGTCGC
GAGCGCTTGC ATCCCACAAC TCCGGTGCCA GAAGCCCGTC AGCCCCACAG CGACCAAGCC
GATCAAGCCG TGGCTGTGGT GACTGTCCAT CGCAGCAAAG GGCTGGAGTA TCCAGTGGTG
ATCTGTCCCT ATCTCTGGCA AGCCCCGCGC CAAGAAAGTG GACCGCTCTG GCGGGAAACG
GGTGATGGTC GCTGGTTCAT TGCGATCGAT TCCCATTGGG GAAAGGGACA CCGTGCTGCG
CAACAAGCGA CTGACGACGC CATGGCGGAA GCGGAACGGT TGGCCTACGT CGCGATGACC
CGTGCCCGCT CCCAGTTGAT GGTGGTTTGG GTGCGTTCAA CGGGACAAGA GGGCGCTCCA
CTGCCGTGTT GGCTGTTTGG CGCGGACGCC ATCCATGATT CGGTGGATCA GTTCAACGAT
GACCGCCTCG ACTTGGCCCT GAGCGAGCGG GGTGTGTCGC TGTTGCGCCG TGTTTTGCCC
GATCCCCTGC TCCCATCTCA GCGTTGGCGA TCACTGCCGA GCGAGCAGCC GCTCGGCCTT
GGAGAAACGC CTGGACGAAT CGATCGCAGC TGGGGACGGG CGAGTTACTC CGCCTGGATC
TCAGCGCCTG TGGATCCTGT CGTGCATGAA CAAGGTCGAG ACCCTGACCC CGGAGCTGAG
GAGTGCAGTC TCACTGGACC GGAGCTTTGG CCAGAGCAAG GGCCCCTTGC CGATTTCCCG
AGGGGTGCCG TGGCTGGGGA TTGCCTGCAT CGGATTCTTG AGCAGATCCC ATATCAGGCC
GCGGATGCCG ACGACCCTTC CCTCTTGGAC AGTCTTCGGG CAGCTGTGAT CGACTCGGAA
CTCAGGCGGG CTGGGTTGGA TTGCAACCTG CAATCGATGG TGATGGAGGG GCTGGGTTAT
GTACTCAAAA CTCCCCTTGG TGGCCCCTTA GAGCAGTTGC AACTCAGCCA GTTGGGGCTG
AAGCAACGCA TCCATGAATT GAGCTTTGAT CTGCCGGTAG GCCATGTACG CACCAAGGAT
CTCGTTCAAG CCTTTCATTG TTCTCCCAAC GCACGGTTTG GAGGGCGATA TATCGATCAC
CTCGCCACGT TGGGGGTGAA TAGCCGTGGC TTCCTCACCG GCTCGATCGA CCTGGTGTTT
TGCGACCCCC ATCAGTCGCG CTGGTGGGTT TTGGATTGGA AGAGCAATTG GATCGGGGAA
CGTCGATCGG AGGGCAGCCC TGGCCGTTGC GGACCGCGTC ACTATCACCA GGACGCCATG
CAAGAGCAGA TGATTCACCA TCACTACCCC TTGCAAGCCC ATCTCTACTT AGTTGCCTTA
CACCGACACC TGAGTTGGCG TCTGCCGGAT TACAACCCCG AACAGCACCT GGGTGGATAT
GTCTATGTCT TCTTAAGAGG GATGCCTGGA GATCAGCTTG TTTCGCTTGA GGACAGCGCA
AGTGTGGGAC CAGGACGTCT GGTGGAACCT GCACCGTTGG AGCGGGTGTT GGCCCTGGAT
CGTGCCTTGT CTGAGGTTGA TCGATGA
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| Protein sequence | MAERFDANTY PLKPGIRLLE ASAGTGKTFA LAHLTLRLIT EAAYPLEALL VVTYTEAAAE
ELRSRIGQRL QQALVGLEQL ENEMFPSAPD PVMAAWWEQC TASADRRIRI RRLLVALEQL
DRADIATIHG FCRRSLRRLA LDNGAAIEPQ LESDAAALQA EVVQYLWQQE LLTLPDEQLQ
GLRQRGLSPQ TFGAALARLD GDPNPRLAGD STSVDRQSPL RDQLPCWIES LWHAFQSHWE
SDHAALESGF RAAAAQWKSQ GCGSTSPYSA KPRTDRCAVI NQWIAIQNGV PSLAAIASVE
KPLKEYFHPG SWCRMARKCG EDEPSLVASA LQSAIGALWD EPLERVWRYL LERGLEELRE
RRGRRGAITF AGLLAAMDPG DGQVDWLAPL QERYRAVMVD EFQDTDPVQW RLLRRAFGDR
IHHLLLLVGD PKQAIYRFRG GDLGTYLEAR QQVDRIDHLL DNFRATASLM DGLNTLMAPG
MPRSHLEIPA VRAQAVDQVS PTTAALQLLE LELDTPASRT ALEQQLPQHL AAVVFEILEG
PDQPDPSDLC VLVSRHQQAT DLRRALGAAG IPSRLVTQGD VLESEAALVV QRLLDALADP
GDDRCLRLLV SSPLMNWSLE AMENEGGLDQ LAEQLRLWER ALPKLGLMGC LAQLLEGQRT
ADLSERGRML GDLQQVGRLV QEAMHRQGLD SATAANWLRR ERLHPTTPVP EARQPHSDQA
DQAVAVVTVH RSKGLEYPVV ICPYLWQAPR QESGPLWRET GDGRWFIAID SHWGKGHRAA
QQATDDAMAE AERLAYVAMT RARSQLMVVW VRSTGQEGAP LPCWLFGADA IHDSVDQFND
DRLDLALSER GVSLLRRVLP DPLLPSQRWR SLPSEQPLGL GETPGRIDRS WGRASYSAWI
SAPVDPVVHE QGRDPDPGAE ECSLTGPELW PEQGPLADFP RGAVAGDCLH RILEQIPYQA
ADADDPSLLD SLRAAVIDSE LRRAGLDCNL QSMVMEGLGY VLKTPLGGPL EQLQLSQLGL
KQRIHELSFD LPVGHVRTKD LVQAFHCSPN ARFGGRYIDH LATLGVNSRG FLTGSIDLVF
CDPHQSRWWV LDWKSNWIGE RRSEGSPGRC GPRHYHQDAM QEQMIHHHYP LQAHLYLVAL
HRHLSWRLPD YNPEQHLGGY VYVFLRGMPG DQLVSLEDSA SVGPGRLVEP APLERVLALD
RALSEVDR
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