Gene Syncc9902_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1376 
Symbol 
ID3742880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1335872 
End bp1336765 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content54% 
IMG OID637771560 
Producthypothetical protein 
Protein accessionYP_377384 
Protein GI78184949 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGC GATTGAGATT CCCAAGGCGT TGGTGGACGC GTTCTGGGCT TGCCTTGAAG 
CGGTCTGATC TTGAGTCTGT GAGTCGTGGA CAGCAGGCTC AAATTCTTGG GTCGATGATT
CGCGAACGTC GAGAGTTGAT GGGGTTAACG CTGAGAGATC TGGCAACTCA GATCAGGATT
ACAACGCCAG TTCTCGAAGC CCTAGAGCGT GGCTGGATCG ATCGTTTGCC TGAGCGAACC
TATTTGGCTT CCATGCTTCC TCAGGTTGAG AGGTGCCTGG AGCTCCCCCC TGGCTGTTTG
GAACCGGTTC TTCCAGTTTC GGTGTCCCGT TCGAAGCTGA AATCTGTTCG CGGTTTTGGT
CGCTTTACCC CTGGAAGTAT TGATGTCTTT ACGACCTGGC AAGGGAGCGT GGTGTATGGC
GCCGTCATGA TTTTTAGCCT TGTGGCGATG AATCGTCAGC AGCAAACTTT TGCTCGTCAA
AACGGTCTCG CCTTGCAGCC TGTAAAAGCC AACATTCAGG TCGTCTCGTC AGCGCCTGTC
ACGTCGACGG CTGGGGCTTT ATCCACCTTT GAGGGTTTGC GACCCCTCGA GCAGGCTCGC
CAGCGTTTGC CTCAAGATTG GCTGAAAGGC GTTGCCACGT CCGTCAATCC AAACGATGGA
GTGTTGCAAC TGTTGTTCAA CCAACCGAGT CAACTGAAGA TCAACAGTGA GGGTGGCGAT
CGTGTGCAGC TTGCTGCCGG GCAAGGTCAG CTCACCTTTC AGATGAGGGC ACCGATTGAC
CTAACCATGA CCCCACCGCC TGAAGAGATC CAACAGGTGA AGTGGAACGG TGTTCCGTTA
AAGCAAGTTC CCAAGTTTTC AGGGGTATAC CGGGTGGAGA AGTCTTCTCT TTGA
 
Protein sequence
MNLRLRFPRR WWTRSGLALK RSDLESVSRG QQAQILGSMI RERRELMGLT LRDLATQIRI 
TTPVLEALER GWIDRLPERT YLASMLPQVE RCLELPPGCL EPVLPVSVSR SKLKSVRGFG
RFTPGSIDVF TTWQGSVVYG AVMIFSLVAM NRQQQTFARQ NGLALQPVKA NIQVVSSAPV
TSTAGALSTF EGLRPLEQAR QRLPQDWLKG VATSVNPNDG VLQLLFNQPS QLKINSEGGD
RVQLAAGQGQ LTFQMRAPID LTMTPPPEEI QQVKWNGVPL KQVPKFSGVY RVEKSSL