Gene Syncc9902_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1360 
Symbol 
ID3742089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1316715 
End bp1317368 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content58% 
IMG OID637771544 
Producthypothetical protein 
Protein accessionYP_377368 
Protein GI78184933 
COG category[S] Function unknown 
COG ID[COG3689] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.944769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGAG GCGCACTTCT GATTACTTGG GGCTGGATTG TGCTCTGGAG CGTCATCTCC 
GGACGCCTCG ACCTGCTCCT TCGTGGCGTG TTCCATGGCC TGGTTGGGAT CTCGGGAGCT
GCGCTGCTCC TAGCGGGAGT TGTCTTGTTA ATCCGCCAGC GCGGTCGATA TGAACGGTTG
CCATGGGCCT GGTGGAGCAG TGCAGCCATT GCACTCCTTG TCTTACTCGT ACCGCCCAAT
CCATCCTTCA GTGATCTCGC CGAAAGCCGA CCGCAAGGAT TGCCGGAGCC CCCTGAACTT
GCCTTCGTCT TACCACCAGA ACAACGAACC CTGACGGAAT GGGTTCGACT CCTGCGAAGT
CAACAAGATC CCGATCTCGT GGACGGAAAC CCAGTCAACA TCAGCGGCTT TGTTTGGACA
CAGCAAAGCG GACCACCGCT GATTGCCCGC CTGACCGTGC GGTGTTGTCT GGCCGATGCC
ACCCCAGCCG GCTTACCGGT GCATTGGCCA GAGGGGTTCA TTCCAAACAC CAACCAATGG
TTGTCAATCC AGGGGGAGAT GGTGGTGACC ACGCTTGATG AGAAGAGGGT TGCAGTGGTG
ATGCCCAAAG CGATCACTTC GATATCCCGC CCCAAGCGGC CTCTTGAACC ATGA
 
Protein sequence
MIRGALLITW GWIVLWSVIS GRLDLLLRGV FHGLVGISGA ALLLAGVVLL IRQRGRYERL 
PWAWWSSAAI ALLVLLVPPN PSFSDLAESR PQGLPEPPEL AFVLPPEQRT LTEWVRLLRS
QQDPDLVDGN PVNISGFVWT QQSGPPLIAR LTVRCCLADA TPAGLPVHWP EGFIPNTNQW
LSIQGEMVVT TLDEKRVAVV MPKAITSISR PKRPLEP