| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1320 |
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| Symbol | |
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| ID | 3743222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1277117 |
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| End bp | 1278088 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637771503 |
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| Product | trans-hexaprenyltranstransferase |
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| Protein accession | YP_377328 |
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| Protein GI | 78184893 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR02749] solanesyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.195026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACCG TCACCGAGCT GCTGCAACCG GTTGAGACCG ATCTCGAGAC TTTGCTCGGC
GATTTGCGCA ATTTGATTGG TGCGGGGCAT CCCATCCTTC AAGCTGCGGC GGAACATTTG
TTCAGCGCTG GCGGTAAACG CATCCGCCCC GGCATTGTTT TATTGATCTC GAGAGCCCTC
GCCGCTGATG GAGAGCTCAC ACCGCGCCAT CGGCGTTTGG CAGAGATTAC CGAGATGATC
CACACCGCAT CGTTGGTTCA CGATGACGTG GTGGATGAAG CATCGACCCG TCGAGGTGTC
GACACCGTTC ACAGCCGATT CGATGCCCGC GTTGCTGTTC TTGCTGGTGA TTTTCTTTTT
GCACAGGCGA GTTGGCACCT TGCCAATCTT GATGATCTCG ATGTCGTCAA ATTATTGAGC
CGAGTGATCA TGGATCTCGC TGATGGCGAG GTCAAACAAG GCCTTTATCG ATTCGATACG
TCCCAGAGTT TTGAGACGTA TTTTGAAAAA AGTTACTGCA AAACAGCTTC TTTAATCGCG
AACAGTTCCA GGGCCGCTGG TGTTTTGAGT GAGTGCAATC CACAAGAATT AGATTCTCTT
TATCAATTCG GTCGCCAATT GGGTCTGGCC TTTCAAGTTG TCGACGACAT TCTTGATTTC
ACTGGTAGCG ACCAGCAGTT GGGTAAGCCA GCTGCCAGCG ATTTAGCGAC TGGCTATTTA
ACAGCACCCA CCTTTTACGC ACTGGAAGAA AATCCTGAGC TGGGAGCGTT GATCGATCGT
GAATTCAGCG AAGCTGGCGA TCTTGAACAA GCTCTCGAAC TAGTCCGTTC ATCCCAAGCC
ATTCCTCGGA CCCGTGAATT GGCTGAGAAA TTTGCCCGTG AGTCCCGCGA ATCAATTGCT
TGGATGGCTG ATTCACCCTC GAAGCGGGCT CTGCTCGAGC TGCCTGATTT TGTCCTTAGC
CGCTTGTATT AA
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| Protein sequence | MITVTELLQP VETDLETLLG DLRNLIGAGH PILQAAAEHL FSAGGKRIRP GIVLLISRAL
AADGELTPRH RRLAEITEMI HTASLVHDDV VDEASTRRGV DTVHSRFDAR VAVLAGDFLF
AQASWHLANL DDLDVVKLLS RVIMDLADGE VKQGLYRFDT SQSFETYFEK SYCKTASLIA
NSSRAAGVLS ECNPQELDSL YQFGRQLGLA FQVVDDILDF TGSDQQLGKP AASDLATGYL
TAPTFYALEE NPELGALIDR EFSEAGDLEQ ALELVRSSQA IPRTRELAEK FARESRESIA
WMADSPSKRA LLELPDFVLS RLY
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