| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1278 |
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| Symbol | secF |
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| ID | 3743297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1238273 |
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| End bp | 1239259 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637771458 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_377286 |
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| Protein GI | 78184851 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.630686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGACG CGTCTTCCCC CGCGACGGCC GATGTCCGTC AGTTGCGCTG GTCTTTGAGT
GCCATGCGAC AACGCGTGTG GCTGATTTCA GCAGCGGTTG TTGTGGTGAG CCTGATTGGT
TTGGTTTCGA GTTGGCTGGA TCCAACGATC CGTGCCCCGC TGCGGCCTGG CCTTGATTTC
ACGGGCGGCA CCCAAATCCA GTTGGAGCGT CAATGTGATC CGGCCTGCGC CGATCTCAAA
GCCATTGCGG TTTCGAATGT CATCCGTGAA TTGGCTCTTC CCAAAGAGGG CAATGCGCCG
CTGCCCCAAC TCAATGCACC TCGGGTGCAA TTGCTCGATG CTGGCCAATC GCTGTTGTTG
CGTCTCCCTA CGCTGTCTGC CGCCCAAGGC CAAGCGGTCA TTCAGGCGGT TGAACCGGTC
GCAGGTCCGT TCAAGGATGG TGGTCAATCG GTTGACACCA TTGGGCCGAG CCTGGGTCGT
CAGTTGCTCC AAAGCAGTTT GGTGTCGTTG CTGGTGGCGT TTGCGGGGAT TGCTGTTTAT
ATCTCCTTCC GATACGACCG GCGGTATGCC TTCTTGGCTT TGGTCGCCTT GGCCCATGAC
GTTGTCATTG TGTGCGGCTT CTTTGCTTGG CTCGGCTTGT TCTTTCAGCT GGAAGTCGAC
AGCCTCTTTG CGGTGGCACT GCTTACCATT GCCGGCTATT CCGTGAACGA CACGGTTGTG
GTGTTCGATC GGATCCGTGA ACGCACTCAG CAAGGGTCTG ATTTACCTCT GAAGCTTCAG
GTGGATCAGG CCGTTTCAGC GACCCTGACT CGCACGCTTT ACACCAGTGG AACCACCTTG
ATGCCCTTGC TGGCCTTGGT GTTCTTCGGT GGTTCAACCT TGTATTGGTT CGCGATTGCC
CTTGCCCTCG GCGTGGTGGT GGGGAGCTGG TCGAGTATCG CCCTCGCTCC TTCATTGCTC
ACGTTGTGGC AACCACAGGG TGACTAA
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| Protein sequence | MVDASSPATA DVRQLRWSLS AMRQRVWLIS AAVVVVSLIG LVSSWLDPTI RAPLRPGLDF
TGGTQIQLER QCDPACADLK AIAVSNVIRE LALPKEGNAP LPQLNAPRVQ LLDAGQSLLL
RLPTLSAAQG QAVIQAVEPV AGPFKDGGQS VDTIGPSLGR QLLQSSLVSL LVAFAGIAVY
ISFRYDRRYA FLALVALAHD VVIVCGFFAW LGLFFQLEVD SLFAVALLTI AGYSVNDTVV
VFDRIRERTQ QGSDLPLKLQ VDQAVSATLT RTLYTSGTTL MPLLALVFFG GSTLYWFAIA
LALGVVVGSW SSIALAPSLL TLWQPQGD
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