Gene Syncc9902_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1230 
Symbol 
ID3742684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp1190812 
End bp1191477 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content51% 
IMG OID637771410 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_377238 
Protein GI78184803 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.942402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCCA AAAGTCTTGT CGTCTCTCCA TCAATTCTCT CAGCCGATTT TTCGAAACTC 
GGTGCTGAGG TGGAGGCCGT CGACAAGGCA GGTGCTGACT GGATTCACGT TGATGTGATG 
GATGGTCGCT TTGTGCCCAA CATCACCATC GGTCCATTGA TCGTTGAGGC TCTTCGCCCT 
GTGACACAGA AGCCCCTCGA TGTTCACTTG ATGATTGTGG AGCCTGAAAA ATACGTACCG 
GATTTTGCCA AGGCTGGAGC AGACATTATT TCTGTTCAGG TCGAGGCATG TCCTCACCTT 
CATCGCAACC TGGGCCAGAT CAAAGATCTT GGCAAGAAAG CCGGTGCCGT ACTGAACCCT 
GGAACCCCAC TCGACACACT GGACTATTGC CTGGAGCTTT GTGATTTGGT GCTCATCATG 
AGCGTCAACC CAGGTTTTGG CGGACAAAGT TTTATCGAGA ATCAGGTGCA GAAAATCAGC 
GATCTACGCA AGATGTGCGA TGCACGGGGA TTAGATCCTT GGATTGAAGT CGACGGCGGC 
ATCAAAGGAT CGAATGCATG GAAAGTAATC GAAGCTGGTG CCAATGCAAT TGTTTCTGGC 
TCCGGTGTAT TCAACCAACC CGATTACGCC AAGGCGATCG AGGGCATTCG TACGAGCAAG 
CGTTAA
 
Protein sequence
MSAKSLVVSP SILSADFSKL GAEVEAVDKA GADWIHVDVM DGRFVPNITI GPLIVEALRP 
VTQKPLDVHL MIVEPEKYVP DFAKAGADII SVQVEACPHL HRNLGQIKDL GKKAGAVLNP 
GTPLDTLDYC LELCDLVLIM SVNPGFGGQS FIENQVQKIS DLRKMCDARG LDPWIEVDGG 
IKGSNAWKVI EAGANAIVSG SGVFNQPDYA KAIEGIRTSK R