Gene Syncc9902_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1216 
Symbol 
ID3741808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1176997 
End bp1177965 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content53% 
IMG OID637771396 
Productlight-dependent protochlorophyllide oxido-reductase 
Protein accessionYP_377224 
Protein GI78184789 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACAA CGAAGCCGCT ACGAATTTTG ATGACGGGTG CCAATAGTGG CATCGGTGAA 
GCTGCGGCAC GCCACCTCCA GGAAAGCGGA CATGCCCTGA CTGTCGTCTG CAGAAGTCGT
GAACGCGCTG AACAGAGCTT GGATTGGCTT CAAGACCCGA GCAAAATCCT GATTGCAGAT
CTCGCAGATC TGATCGCTGT GAAAAAAATG GCTCATCAGC TTGGTCTCGA TGGCCAGCAG
TTTGATGTTC TTGTTTTGAA TGCAGGTCTT CAATACGCCG GGGTCGATAC ACCCCGTTGG
AGCCAACAGG GATTTGAACT CACCTGGGCT GTCAATCACC TAGCGCACCA GTGCCTCCTT
CAGCTGGTCC TACCCCTCTT GCAAGACAGT CCGTCGCCGC GTGTGGTGAT TACAGCGTCG
GAAGTGCATA ACCCCACGAC GGGAGGTGGT CGGGTCGGAC AGCCTGCTGG TCTTGGCACC
CTGGCAGGAC TGAATCAAGG AAAAGGTGCA TCCATGGTTG ATGGCACCAG CCCCTTCAGT
GCTGACAAGG CCTACAAAGA CAGCAAATTA TGCAATCTAT TGATGGGACT TGAACTCTCC
CATCGACAAC CACAACTACC CGTTTTGTGC TGGAGTCCTG GCCTCGTTAT TCCTCGAAGC
AAGGATGGTT TTTTCCGCGA GAGTCGGAAA GCAAACCCCT GGGGCCAAGC TGTATTCGGC
TTCATCGCAA GAGATCTCTT TCGGCTCACA GAACAACCAG AACGGGCTGG GAACCTTCTT
GTTTCCCTGG TAATGGGTCA TCACGATGCA ACGGGCATGC GCTACTTGAG CAATCACGTT
GTAGCTCCTG GAAAACACAT TTTTGAATCG ACTGAACCCT CGCCAGAAGC AACGGACATG
GATTTAGCCC GCACGCTTTG GCAACTCAGC GAAAACCTGA TCAAAACCAG TTTGCAAACC
CCAGCCTGA
 
Protein sequence
MTTTKPLRIL MTGANSGIGE AAARHLQESG HALTVVCRSR ERAEQSLDWL QDPSKILIAD 
LADLIAVKKM AHQLGLDGQQ FDVLVLNAGL QYAGVDTPRW SQQGFELTWA VNHLAHQCLL
QLVLPLLQDS PSPRVVITAS EVHNPTTGGG RVGQPAGLGT LAGLNQGKGA SMVDGTSPFS
ADKAYKDSKL CNLLMGLELS HRQPQLPVLC WSPGLVIPRS KDGFFRESRK ANPWGQAVFG
FIARDLFRLT EQPERAGNLL VSLVMGHHDA TGMRYLSNHV VAPGKHIFES TEPSPEATDM
DLARTLWQLS ENLIKTSLQT PA