| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1198 |
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| Symbol | prfC |
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| ID | 3743237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1159497 |
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| End bp | 1161143 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637771378 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_377206 |
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| Protein GI | 78184771 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.18444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCA GCCAAGCACC CCTAGATATT GATTTGGCCA AGCAATTGGC TGATGCCGTG
GATCGACGTC GCAATTTCGC GATCATCTCC CACCCCGATG CTGGTAAAAC AACACTCACC
GAGAAGCTTC TGTTGTATGG CGGTGCCATT CAGCAAGCCG GTGCCGTGAA GGCGCGGGGG
GAGCAACGCA AGGTGACGTC CGACTGGATG GAACTTGAAA AGCAGAGGGG AATCTCGATT
ACCTCCACTG TTCTCCAATT CGACTACGGC ACAACAACGA TCAATCTGCT CGATACGCCT
GGACACCAAG ATTTCTCCGA AGACACCTAC CGGACCTTGG CGGCTGCAGA TAACGCTGTG
ATGTTGGAGG ACGCTGCGAA GGGGCTTGAA CCGCAAACGC GCAAGTTGTT TGAGGTTTGT
CGAATGCGAC AGATCCCGAT TTTCACGTTC ATCAACAAAA TGGATCGCCC CTGCCGCGAT
CCGCTGAGTT TGCTTGATGA AATTGAATCT GAACTTGGCC TGATTCCTTG GGCTGTGAAC
TGGCCCATCG GTAGCGGTGA ACAATTCCGA GGTGTCATCG ATCGCCGCAC CCGCGAGGTG
ATCTTGTTTA GTCGTGCCGG TCGAGGTCAA CAGGCCACGG AACGAAAGTT GTCGCTGAAT
GATCCGGCCC TACGTGAACT GGTCGAGGAG GACCTTCTCG ATCTAGCCAT TGAAGAACTT
GAGCTGCTGG AGGCTGCAGG TGCCGATTTG GATTTAGAGG CGGTGCATTC AGGCGATTTG
ACACCGGTCT TTTTTGGTTC GGCCATGACC AACTTTGGTG TTCGTCCCTT CCTCGACGCA
TTTTTGGAGC TCGCTCAACG ACCGATTGGT CGTTCAAGCA GCGACGGAAT GATTGATCCG
CTTCGAGAAG ATTTCTCGGG ATTTGTCTTT AAGTTGCAGG CCAACATGGA TCCGCGCCAT
CGCGATCGCG TCGCTTTTGT TCGTGTTTGC AGTGGTCGTT TTGCCCGCGA TATGACGGTG
AAACACGCTC GAAGCGGTAA AGCGATTCGC TTATCGCGTC CCCAAAAACT TTTTGGACAG
GATCGTGAAG TCGTTGAAGA TGCTTACCCC GGGGATGTGA TTGGTTTGAA CAATCCGGGA
ATGTTCGCAA TCGGCGACAC CCTTTATGTG GGGTCAAAGG TGGAATTTGA GGGAATTCCT
TGCTTCAGCC CAGAAATCTT CAGCTGGCTT CGTAATCCGA ACCCCTCCGC TTTTAAGAAT
TTTCGAAAGG GGGTTAATGA ACTGCGTGAG GAGGGTGCTG TACAAATTCT CTACGACACT
GATGAAAGTA AGCGGGATCC AATACTTGCT GCTGTGGGTC AACTACAACT CGAAGTTGTG
CAGCACCGAC TTGAAAATGA GTATGGCGTT GAAACACGAT TAGAACCGCT TGGATATCAA
GTGGCTCGTT GGGTAACAGG GGGCTGGCCA GAACTCGATC GTTTGGGGCG CATTTTTAAT
TGCAAAACAG TTCGCGATGC GTGGAATCGG CCAGTGCTTT TATTTAAAAA TGAGTGGAAC
CTCAATCAGC TGAATCAAGA TCATCCCGAG TTTGAATTGA GCAACGTTGC TCCTGTCGTG
AGTGGTGTTG AGCCCATCAG CCTGTAG
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| Protein sequence | MSSSQAPLDI DLAKQLADAV DRRRNFAIIS HPDAGKTTLT EKLLLYGGAI QQAGAVKARG
EQRKVTSDWM ELEKQRGISI TSTVLQFDYG TTTINLLDTP GHQDFSEDTY RTLAAADNAV
MLEDAAKGLE PQTRKLFEVC RMRQIPIFTF INKMDRPCRD PLSLLDEIES ELGLIPWAVN
WPIGSGEQFR GVIDRRTREV ILFSRAGRGQ QATERKLSLN DPALRELVEE DLLDLAIEEL
ELLEAAGADL DLEAVHSGDL TPVFFGSAMT NFGVRPFLDA FLELAQRPIG RSSSDGMIDP
LREDFSGFVF KLQANMDPRH RDRVAFVRVC SGRFARDMTV KHARSGKAIR LSRPQKLFGQ
DREVVEDAYP GDVIGLNNPG MFAIGDTLYV GSKVEFEGIP CFSPEIFSWL RNPNPSAFKN
FRKGVNELRE EGAVQILYDT DESKRDPILA AVGQLQLEVV QHRLENEYGV ETRLEPLGYQ
VARWVTGGWP ELDRLGRIFN CKTVRDAWNR PVLLFKNEWN LNQLNQDHPE FELSNVAPVV
SGVEPISL
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