Gene Syncc9902_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1192 
Symbol 
ID3743231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1155661 
End bp1156392 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content55% 
IMG OID637771372 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_377200 
Protein GI228933130 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0525282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTGAAC TCAGACGTCT GTTGATTCAG CCTGACCGAT TCGTTGGATC GGAGCTGTTA 
ACGCTCCAGA ACGATGAATC CCACTACCTC CGACGTGTGC TTCGCTTGCG GATTGGTGAT
CCCCTGGCGA TTTCCGATGG CTGTGGCCAG CTCTGGCAGG CAGAACTGGT CGATGAATAC
ACAGTGAAGA CCCAACCCCA TCCATGCGAA CAGGTCGTTC AACCTCATCC AAGATTGGGA
CTTGCTGTGT CGATCATCCG TCGTGGTTTT GACGATGTGG TGAGGATGGC CTGTGAACTC
GGCATCGATG CGATTCAACC GCTTCGATGT GAACGGACTG TTCCGCAGGC TGAGCACCGT
CCAGATCGCT GGAACACGAT TGTTCGTGAA GCGGTCGAAC AGTGTGAGCG CCTTTGGAAA
CCAACCGTTT TGGAGCTCAA CTCCCTTGAT TCGTGGCTGA ATTCCTGTTC TGGCCAGAAA
GCTGTTGGTG TAACGCGGAC GCCCAACGTT GGCCCACTGA AGGATTGGTT TCAGCAGAAG
GCCGCTCCAG GTCAAACCAC ATGGTTGATT GTTGGTCCCG AAGGAGGCTG GACGGTGGCT
GAACTCGAAG CACTGAACGA TCATTCAGTC GTCCCGATCC ATTTGGGACC TTCAATTCTG
CGAACGTCCA CCGCCGCAGT GGCTGGGGCC GTTGAACTAA TTCGTTGGCG TGAGCATCAA
CTCAACTCCT GA
 
Protein sequence
MRELRRLLIQ PDRFVGSELL TLQNDESHYL RRVLRLRIGD PLAISDGCGQ LWQAELVDEY 
TVKTQPHPCE QVVQPHPRLG LAVSIIRRGF DDVVRMACEL GIDAIQPLRC ERTVPQAEHR
PDRWNTIVRE AVEQCERLWK PTVLELNSLD SWLNSCSGQK AVGVTRTPNV GPLKDWFQQK
AAPGQTTWLI VGPEGGWTVA ELEALNDHSV VPIHLGPSIL RTSTAAVAGA VELIRWREHQ
LNS