Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1192 |
Symbol | |
ID | 3743231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1155661 |
End bp | 1156392 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637771372 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_377200 |
Protein GI | 228933130 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0525282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGTGAAC TCAGACGTCT GTTGATTCAG CCTGACCGAT TCGTTGGATC GGAGCTGTTA ACGCTCCAGA ACGATGAATC CCACTACCTC CGACGTGTGC TTCGCTTGCG GATTGGTGAT CCCCTGGCGA TTTCCGATGG CTGTGGCCAG CTCTGGCAGG CAGAACTGGT CGATGAATAC ACAGTGAAGA CCCAACCCCA TCCATGCGAA CAGGTCGTTC AACCTCATCC AAGATTGGGA CTTGCTGTGT CGATCATCCG TCGTGGTTTT GACGATGTGG TGAGGATGGC CTGTGAACTC GGCATCGATG CGATTCAACC GCTTCGATGT GAACGGACTG TTCCGCAGGC TGAGCACCGT CCAGATCGCT GGAACACGAT TGTTCGTGAA GCGGTCGAAC AGTGTGAGCG CCTTTGGAAA CCAACCGTTT TGGAGCTCAA CTCCCTTGAT TCGTGGCTGA ATTCCTGTTC TGGCCAGAAA GCTGTTGGTG TAACGCGGAC GCCCAACGTT GGCCCACTGA AGGATTGGTT TCAGCAGAAG GCCGCTCCAG GTCAAACCAC ATGGTTGATT GTTGGTCCCG AAGGAGGCTG GACGGTGGCT GAACTCGAAG CACTGAACGA TCATTCAGTC GTCCCGATCC ATTTGGGACC TTCAATTCTG CGAACGTCCA CCGCCGCAGT GGCTGGGGCC GTTGAACTAA TTCGTTGGCG TGAGCATCAA CTCAACTCCT GA
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Protein sequence | MRELRRLLIQ PDRFVGSELL TLQNDESHYL RRVLRLRIGD PLAISDGCGQ LWQAELVDEY TVKTQPHPCE QVVQPHPRLG LAVSIIRRGF DDVVRMACEL GIDAIQPLRC ERTVPQAEHR PDRWNTIVRE AVEQCERLWK PTVLELNSLD SWLNSCSGQK AVGVTRTPNV GPLKDWFQQK AAPGQTTWLI VGPEGGWTVA ELEALNDHSV VPIHLGPSIL RTSTAAVAGA VELIRWREHQ LNS
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