Gene Syncc9902_1186 details

Gene Information

• Locus tag: Syncc9902_1186
• ID: 3743225
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 1152469
• End bp: 1153140
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637771366
• Product: hypothetical protein
• Protein accession: YP_377194
• Protein GI: 78184759
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG2755] Lysophospholipase L1 and related esterases

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.289249
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGACCGA GACAACTCGT GGTTTTGGGT GATAGCGGCG TTCTTGGCTG GGGGGATCGG 
GACGGTGGTG GTTGGTGCCA GCGATTACGG ATGGATTGGA TGCAACTTCC TTCCGCACCG 
GTGATCTATC CACTCGGTGT TCGAGGCGAT GGAATTGAAC GGATTGCAGC GCGATGGCGG 
CATGAATGGT TGTGTCGCGG GGAACTTCGG CGACAACACC CCGACGGTTT GCTGCTGAGT 
GTTGGCCTCA ATGACACAGC CCGAATCGGT CGCAGTGATG GCCGCCCCCA ACTAGAGCCA 
GACGCCTTCG CCTTTGGCAT CAGCCAACTT CTGATGGAGA TGAGATCCGT AACGAACGTT 
TTCGTTCTTG GGCTCACTCC AGTGGATGAA CATGTGATGC CCTTTGCGGA GTGCCTTTGG 
TACAGCAACA AGGCAATTGC CGCGACGGAA GCAGCTCTAG CGGAACAGTG TCGTGAGGCC 
AATGTGCCGT TCTATGCCCT TCATGCCGAA ATCCAGGCAC AAACCGATTG GTTGCAGTGG 
ATCGAGCCCG ACGGGATTCA CCTCAATACG AACGGCCATT CCTGGATCTA CAACGCACTC 
CAGCACTGGC CACCGCTGTT GAATTGGGCA GGACTTTCAC CACTGAACAC ACCCACCCCG 
ATCAATGGGT AA 

 

Protein sequence

MGPRQLVVLG DSGVLGWGDR DGGGWCQRLR MDWMQLPSAP VIYPLGVRGD GIERIAARWR 
HEWLCRGELR RQHPDGLLLS VGLNDTARIG RSDGRPQLEP DAFAFGISQL LMEMRSVTNV 
FVLGLTPVDE HVMPFAECLW YSNKAIAATE AALAEQCREA NVPFYALHAE IQAQTDWLQW 
IEPDGIHLNT NGHSWIYNAL QHWPPLLNWA GLSPLNTPTP ING