| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1134 |
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| Symbol | |
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| ID | 3743270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1099338 |
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| End bp | 1100747 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637771314 |
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| Product | 23S rRNA methyltransferase/RumA |
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| Protein accession | YP_377142 |
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| Protein GI | 78184707 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGACC AAACGGTTGG AAACGAGCCC GCGCCAAGGC CTGGCTTGAC GATCAACGTT
GAATGTTCTG ATCTCGATCG CAATGGAAAA GGCATTGCTC GATGGAACGG CTGGGTCGTT
GTTATCGATG ATTTATTGCC TGGCGAAAAG GCACAGGTGC AACTGCAGCA GCGTCAACGC
TCACGCTGGC TAGCTCGACG GGGCGAGCTG CTTCAACCAT CGGACGACCG TCGCCGACCA
CCCTGCATCC TTGCCGCGGA CTGTGGTGGC TGCACCCTTC AATCCCTCAA TGAATCCGCC
CAAAACAGTT GGAAGGTTTC ATCACTGCAG CAGACCATGC AACGTATCGG AGGGATTGAT
GACACACCAC TGCCGCTCTT AGCGGATGAA AGCCGCGGCT TGGGCTACCG CAACCGTGCC
CTGATTCCCT TAAATCGCGA AGGTGATGGC CGTTTACGTG CCGGGTATTA CCGCCCGCGA
AGCCACCGAA TCGTCAATTT GAATCACTGT CCCGTTCTTG ACCCTCGGCT CGATCAACTC
ATCGAACCCA TTAAGCAGGA TTTGGATTCA ACGGGGTGGG CTGCTGACCA TGATCTGATT
CACGCCAAAG GTTTGCGTCA TCTTGGTCTG CGTCTGGGGC ACCACAGTGG AGAAGTGTTG
ATCACCTTGA TCAGCTCCCA TGATCGCTAC CCCGGCTTAT TGGAACTGGC CGAAGAGTGG
ATGGATCGTT GGCACATGGT GAAGGGTGTT TGCCTCAATC TCCAACCCAA GCCCAATAAT
TTGGTTCTAG GAGCTCAAAC CTTCCTTGTT GCGGGCTCGG ACACGATCGC GGAGGAGTTT
TGTGGAATCC ATCTTCAACT CAGTAGCACT ACCTTTTTTC AGATCAACAC CCCTCAGGCA
GAGCGCATCG TTCATGTGCT TTGCGACTGG TTGAAAACCG AACTTGGTGA AGGCACTGTC
GTCGATGCTT ACTGCGGTAT CGGCACCATC AGCCTTCCTC TTGCCGCCCA GGGGTTTGAG
GTAATTGGCT TAGAACTTCA TCAGGGGTCT GTCGACCAAG CTCTCCTGAA TGCCATGCGA
AATAACCTGT CAAAAGGGTG TCGTTTTCGG GCTGGAGACG TTGTGGATCT TTTGGAATCT
GCCTTGTTTG GGGCAGATGC CTTGGTGCTT GATCCACCTA GACGTGGGCT TGATGCTCGC
GTCATTCAAA CCATTCTCGA CAACCCACCC AAGCGTTTGG CCTACCTCAG TTGTGATCCT
GCAACCCAGG CAAGAGACTT GAAATTGTTG ATGCAGCCGG CTGGCCCTTA TCGATTAAAG
AAGCATCAAC CCATTGATTT TTTCCCCCAA ACCACCCACT TGGAGTCCCT CGCTCTGCTG
GAACGCGTTA ACTCCGAAGT TCGGCTTTGA
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| Protein sequence | MDDQTVGNEP APRPGLTINV ECSDLDRNGK GIARWNGWVV VIDDLLPGEK AQVQLQQRQR
SRWLARRGEL LQPSDDRRRP PCILAADCGG CTLQSLNESA QNSWKVSSLQ QTMQRIGGID
DTPLPLLADE SRGLGYRNRA LIPLNREGDG RLRAGYYRPR SHRIVNLNHC PVLDPRLDQL
IEPIKQDLDS TGWAADHDLI HAKGLRHLGL RLGHHSGEVL ITLISSHDRY PGLLELAEEW
MDRWHMVKGV CLNLQPKPNN LVLGAQTFLV AGSDTIAEEF CGIHLQLSST TFFQINTPQA
ERIVHVLCDW LKTELGEGTV VDAYCGIGTI SLPLAAQGFE VIGLELHQGS VDQALLNAMR
NNLSKGCRFR AGDVVDLLES ALFGADALVL DPPRRGLDAR VIQTILDNPP KRLAYLSCDP
ATQARDLKLL MQPAGPYRLK KHQPIDFFPQ TTHLESLALL ERVNSEVRL
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