Gene Syncc9902_1115 details

Gene Information

• Locus tag: Syncc9902_1115
• Symbol: uvrC
• ID: 3743075
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 1076837
• End bp: 1078876
• Gene Length: 2040 bp
• Protein Length: 679 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637771293
• Product: excinuclease ABC subunit C
• Protein accession: YP_377123
• Protein GI: 78184688
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.86041
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGGCCCT CAATTTGGCT TCAACGGGGT GGAACTACGG CGGCTGATCA ACCCTTGGCT 
GACTCGATCT CAGGGACGCC TCTCCTCACT CAGCCGGAGC GTTTGGAACG ACGCTTAAAA 
GATATTCCTG CTGAACCCGG TTGTTACCTC ATGCGTGATG GTGATGACCG GATTTTGTAT 
GTCGGCAAAT CGAAAACATT GCGCAGTCGA GTGCGTAGTT ATTTTCGTAG CCGTCACGAT 
CTGTCGCCGC GCATTCGGCT GATGACTCGG CAGGTCTGTG AGATTGAATT CATCGTTACA 
GATAGCGAGG CAGAGGCTCT TGCCCTTGAA TCTAATCTCA TAAAAAATCA TCAGCCTCAT 
TTTAATGTAT TACTAAAGGA CGACAAAAAA TATCCTTATT TATGCATTAC TTGGAGTGAA 
TCTTATCCGC GTATCTTTAT TACTCGACGT CGACGTTTTA GGAGCCCATT AGATCGCTTC 
TATGGACCTT ATGTTGATGT AGGACTGCTG CGCCGCACGC TTTTTCTTGT TAAGCGTGTC 
TTCCCATTGC GTCAAAGACC AAGGCCGTTG CATCAGGATC GTACTTGCTT GAATTACAGC 
ATTGGCCGCT GCCCTGGGGT CTGTCAGGAA AAAATTAGCT CCGACGATTA TCACCAAACT 
TTGCGCAAAG TGGCGATGGT ATTTCAAGGT CGAAGTGATG AATTGCAGAA CCTCTTGCAG 
GAACAAATGC ATAAATATGC TGATCGTACG GATTACGAAT CAGCGGCCCG TGTACGCGAT 
CAACTTCAGG GGCTAGATCA ACTCACAGCT GATCAGAAGA TGAGCCTCCC CGACTCATCG 
GTCAGTCGTG ATGTCCTTGC GTTGGCCTGT GATGAGCGGC TCGCTGCAGT TCAGTTGTTT 
CAGATGCGCG CCGGAAAACT TGTCGGACGG CTTGGCTACA CAGCCGATGC GGCTGGTCTT 
TCTCCTGGAC TGATCTTGCA ACGCGTCATT GAGGAGCATT ACAGCCAAGT CGATGCGGTG 
GAAGTTCCAC CCCAGCTCCT TGTTCAGCAC CCACTACCTC AACAATCATT GCTGGAGGAA 
TGGCTCACTG AGCAACGTGA ACGCAAAGTT CAAATTCATT GCCCCCAGCG CCGCCAAAAA 
GCCGACTTAA TTGAACTGGT TCAGCGCAAT GCTGAATTTG AGTTGCTTCG GGCCAAGCAA 
GGTCAAGAGC AACAAGCCTT GTCCACAGAA GACTTGGCTC AACTTCTTGA CCTCCCACTT 
CCTCCTCGGA GAATTGAGGG ATACGACATC AGCCATATCC AAGGCAGTGA TGCTGTGGCC 
TCCCAGGTGG TGTTTATCGA TGGTTTGCCG GCGAAACAGC ATTACCGCAA ATACAAAATC 
CAGAGCAGCA GCATCCGTGC AGGGCACAGC GATGACTTCA TGGCCATGGC AGAAATTATG 
CGAAGGCGGT TTCGCCGCTG GGCACGAGCA AAAGCTGATG GGCTCGATCT GGGAGCTTTG 
CGTCAAAAGG GAGGTAGTGC CCTTCAAACG GATGGTCTGA ACGATTGGCC CGATCTCGTG 
ATGATTGATG GCGGCAAGGG TCAGCTTTCA GCTGTCATGG AGGCTCTCCG AGAACTGAAT 
CTCCATGACG ATTTAAATGT TTGCTCCCTC GCAAAGCAGA GGGAAGAGGT GTTCCTTCCT 
GGGGAAAGTC AACCGCTTGA GAGTGAAGCT GATCAGTTGG GAGTTGCGTT GCTTCGTCGA 
CTCCGGGATG AGGCCCACCG TTTTGCCGTG AGTTTTCATC GGCAACAGCG AGGCGAACGG 
ATGAAACGCT CTCGCTTGTC GGATATTCCT GGTTTGGGCG CGAAGCGTGT CAGGGATTTG 
TTGTCGCATT TTCATTCGAT CGATGCCATT CAACTGGCCT CGGTCGACAC ACTCTCAAAA 
GCGCCTGGTG TTGGTCCAGT CCTTGCTCAG GATATTTTCA ACTTCTTCCA TCCCACCGAC 
GAGAACGACG GTTTGCCCTC CTCTCAACTA GAAGGAGAAC AACTGGAGCA CTCCGCATGA 

 

Protein sequence

MRPSIWLQRG GTTAADQPLA DSISGTPLLT QPERLERRLK DIPAEPGCYL MRDGDDRILY 
VGKSKTLRSR VRSYFRSRHD LSPRIRLMTR QVCEIEFIVT DSEAEALALE SNLIKNHQPH 
FNVLLKDDKK YPYLCITWSE SYPRIFITRR RRFRSPLDRF YGPYVDVGLL RRTLFLVKRV 
FPLRQRPRPL HQDRTCLNYS IGRCPGVCQE KISSDDYHQT LRKVAMVFQG RSDELQNLLQ 
EQMHKYADRT DYESAARVRD QLQGLDQLTA DQKMSLPDSS VSRDVLALAC DERLAAVQLF 
QMRAGKLVGR LGYTADAAGL SPGLILQRVI EEHYSQVDAV EVPPQLLVQH PLPQQSLLEE 
WLTEQRERKV QIHCPQRRQK ADLIELVQRN AEFELLRAKQ GQEQQALSTE DLAQLLDLPL 
PPRRIEGYDI SHIQGSDAVA SQVVFIDGLP AKQHYRKYKI QSSSIRAGHS DDFMAMAEIM 
RRRFRRWARA KADGLDLGAL RQKGGSALQT DGLNDWPDLV MIDGGKGQLS AVMEALRELN 
LHDDLNVCSL AKQREEVFLP GESQPLESEA DQLGVALLRR LRDEAHRFAV SFHRQQRGER 
MKRSRLSDIP GLGAKRVRDL LSHFHSIDAI QLASVDTLSK APGVGPVLAQ DIFNFFHPTD 
ENDGLPSSQL EGEQLEHSA