Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1078 |
Symbol | |
ID | 3742462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1038456 |
End bp | 1039757 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637771254 |
Product | ABC transporter, likely sugar solute binding protein |
Protein accession | YP_377086 |
Protein GI | 78184651 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACGAG GCTTCCGGAT TGCCAGCGGC TTGATCGGTC TGCTGTTTGT TCTGGCTTGT CTGGCATGGT CAGGCCAGAA ACAGCCTGTA CCCGTCTCAA TTTTGATGCC TGCGCCCTAT GCGGATGCAA GTACTCAAAT GGTCGAAGCC TTCAATCGTG AGCACCGCGG ATCAATTCAC CTTGAGGTCA TCCGTGGACC CCTGGAAACC GAGTCGATTT CTGATCTCGC AATTAGCAGT TTGTTGCTGG GGGACACCCC CTTTGATGCC CTGTTGATGG ATGTCACCTG GCTGCCGAAA TATGCCGAAG CAGGTTGGCT CGAACCCCTT GATCCCTGGT TCGATCAAGC CGCTCTTGAT CAATTGATCT TGGGCGCTCG CCTTGGCAAT CACCACAAAG GTCAGCTCTA TCGATGGCCC CTTGGCGCTG ATGTTGGCGT TTTGTATTGG CGGACCGACC TGATGGACTC GCCTCCCTCC ACTCCAGAGC AACTGTCCGA CATCGCCATC AATTTGGTCC AAACCAAGCG CGTCACCAAT GGCTATGTCT GGCAAGGAAG GCAATACGAA GGATTGAGTT GCAACTTCGT TGAAGTGCTC CATGGCTTCG GAGGCCAGTG GCTTAACCCA GCCACCGGTC AACTCGAACT CGACGCAACG TCGGCAGCTC GTGCAGCCGC CTGGATGCAA TCACTGATCA CAACTGGAGC CAGTCCAAAA GCGGTAATCA ATTATTCGGA ATCAGAATCG CTGCAGGCAT TTAAAGCCGG GGATGCAGCA TTCATGCGCA ACTGGCCCTA TGCCTGGGCA GAGCTCCAAA AACCCGAAAG CAACGTGCGG GGAAACGTTG GAATTGCACT GATGGTTGCG GAACCCGATC AAAGTCCTGC CGCCACCGTT GGCAGCTGGG GTTTGAGCTT GCTCAAACAG TCACCGCATC AAGAGGCCGC TGTTGAAGCG ATTCGATATC TCACCTCTGA AGCTGCGCAG CGTGAACGGT TCCTCAACCA GGGCTACACC CCCACCAGCA AAAGCTTGTT TAGGGATCCA GAGCTCATCG CGGTGTCGTC GGCCCTTCCT GAAATCGCGA AGGCTTTGGA GTACTCCGTT TCAAGGCCAC CATCACCGCT TTATGCCCAG CTCAGTGATC TTCTTCAACG CCAACTGAAT GGCCTGCTAA CTGCCGAACC AGAGAAGACC AATCGCGATG TCGGCACGGC AACTGCCGCC TCAGCCGCTG CCATGAACAG AGTTCAAACC AAAAGCGACA TGCTGCTTAA AGCGACAGGG GCAGAAGCAT GA
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Protein sequence | MRRGFRIASG LIGLLFVLAC LAWSGQKQPV PVSILMPAPY ADASTQMVEA FNREHRGSIH LEVIRGPLET ESISDLAISS LLLGDTPFDA LLMDVTWLPK YAEAGWLEPL DPWFDQAALD QLILGARLGN HHKGQLYRWP LGADVGVLYW RTDLMDSPPS TPEQLSDIAI NLVQTKRVTN GYVWQGRQYE GLSCNFVEVL HGFGGQWLNP ATGQLELDAT SAARAAAWMQ SLITTGASPK AVINYSESES LQAFKAGDAA FMRNWPYAWA ELQKPESNVR GNVGIALMVA EPDQSPAATV GSWGLSLLKQ SPHQEAAVEA IRYLTSEAAQ RERFLNQGYT PTSKSLFRDP ELIAVSSALP EIAKALEYSV SRPPSPLYAQ LSDLLQRQLN GLLTAEPEKT NRDVGTATAA SAAAMNRVQT KSDMLLKATG AEA
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