Gene Syncc9902_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1047 
Symbol 
ID3743202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp1012012 
End bp1012686 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content56% 
IMG OID637771221 
Productmuramidase 
Protein accessionYP_377055 
Protein GI78184620 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4678] Muramidase (phage lambda lysozyme) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0905977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGGAG TATTGGCCAC ATCTCTTCCG AGTGCTCCCG CCAGAGCGAG CTTTTTGCCC 
CCTGCGACGA GATCGCAGTT AGTGCATTTG CCTGATGTTC AGCCAACCCG AGCGATTCCT 
TACGTCATAA CCCCCGAGCG TCGAGCGATG CTCAATACCA TCCGTTTTGC TGAAGGCACG 
TGGAAGGGTG GCTTTGATGT GGGCTATCGA GTGATGTTTG GTGGTGGCTT GATGAGCTCC 
CTCAACCGGC ATCCCAATCG GGTGATCTAT AGCTCCCGCT ATGCCAGTGC TGCTGCAGGG 
GCTTACCAAT TCATGCCATT TACCTGGGAT TTGGTTCGGC GAAGCTTGGG TGTGACCGGC 
TTCGGACCAG AGGTGCAGGA TCAAGGAGCG CTGTTCTTGA TTCAGCGTCG CAAGGCCCTC 
GGTCTCACAG ACACAGGCAA TCTTTCCCCG TATCTTGCAG CCAAATTGGC GCCGGAGTGG 
GCTTCATTCC CCACGCTTGC GGGTCGGAGT TTTTACGGGC AGCCCGTAAA AAAATACGAT 
CGCCTTCTCT CGTTTTACAA CGTCAATCTT GTGGAGTTAC GGCGGATCCG CGACGAGCGT 
CGCCTTGAAC TTTCTCAGGC GGCTAAGCCA GCCGTTTGCA CAGGCTCTCG AATTGCCTGT 
GCAACGCAGC TCTGA
 
Protein sequence
MSGVLATSLP SAPARASFLP PATRSQLVHL PDVQPTRAIP YVITPERRAM LNTIRFAEGT 
WKGGFDVGYR VMFGGGLMSS LNRHPNRVIY SSRYASAAAG AYQFMPFTWD LVRRSLGVTG 
FGPEVQDQGA LFLIQRRKAL GLTDTGNLSP YLAAKLAPEW ASFPTLAGRS FYGQPVKKYD 
RLLSFYNVNL VELRRIRDER RLELSQAAKP AVCTGSRIAC ATQL