Gene Syncc9902_0956 details

Gene Information

• Locus tag: Syncc9902_0956
• ID: 3743347
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 942694
• End bp: 943368
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637771130
• Product: hypothetical protein
• Protein accession: YP_376966
• Protein GI: 78184531
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0451] Nucleoside-diphosphate-sugar epimerases

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.652455
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACGGG TTGTCGCCGT TAGCGGTGCT TCAGGAAAAA CCGGTTATCG AATTGCAGAA 
GAGTTGTTGG CCGCAGGGGT TCAACCGCGT CTATTGCTTC GTCGCGAATC TGCTGTTCCA 
GCATCTTTGT CGAATTGCGA GCAGGTGCGC CTGAGTATCG AGAATGATTG TGCGCTCGAT 
CAAGCGTTGC TTGGGGCCGA GGCGCTGATC ATTGCCACCG GTGCACGACC ATCGATTGAT 
CTCAGCGGCC CTATGCGTGT GGATGCATGG GGGGTTAAGC GCCAAATTGC AAGTTGCCAA 
CGGGTCAACG TCAACCGCGT GGTGTTGGTG AGTTCGCTCT GTGCAGGACG TTGGCGGCAT 
CCACTCAATC TTTTCGGACT GATTCTTGTG TGGAAAAGGA TCGGTGAACG AGCGTTAGAG 
CGAAGTGGGT TGAATTGGAC TGTTGTTCGT CCTGGAGGTT TGTCTGAAAG GGAGTCTGGT 
CTCGAGCAAG AGGGTATTCG TCTGACAGGC CCGGATCAGC AGGACAAGAA TTCCATTCCA 
CGGCGCCTTG TTGCTCAATG CTGTGTCGAT GCACTTGAGA CCCCCGGCTC GATCGGACGG 
ATCTTGGAAA TCACCAGTGA TGAGAACGTT CCCCGGGTTG CCTTGGCCGA AGCTCTGCCC 
TCAGCAGCCC TCTGA 

 

Protein sequence

MARVVAVSGA SGKTGYRIAE ELLAAGVQPR LLLRRESAVP ASLSNCEQVR LSIENDCALD 
QALLGAEALI IATGARPSID LSGPMRVDAW GVKRQIASCQ RVNVNRVVLV SSLCAGRWRH 
PLNLFGLILV WKRIGERALE RSGLNWTVVR PGGLSERESG LEQEGIRLTG PDQQDKNSIP 
RRLVAQCCVD ALETPGSIGR ILEITSDENV PRVALAEALP SAAL