Gene Syncc9902_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0953 
Symbol 
ID3743344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp940398 
End bp941174 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content58% 
IMG OID637771127 
Producthypothetical protein 
Protein accessionYP_376963 
Protein GI78184528 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACGG AAGACCTGCC GGTGCAACTC GCCCTCGCTG TGGTGGCGTT GATCTCCAAC 
GGTCTATCGG CGTTTGCTGG TGGTGGTGCT GGCTTGGTTC AGCTCCCAGC ATTAATTCTG
CTGGGACTGG ACTTTTCGAC GGCTTTGGCC ACCCATAAAG TGGCGAGTGT GGCCCTCGGC
GTCGGGGCCG CTGGTCGCCA CTGGCGAGCC AGCAGCTTGG ATCGACGCTT ATCGGCTCTC
GTGCTTTGCG CAGGGCTTCC AGGGGTTGTC ATCGGAGCCA ACCTGGTTCT GGCGATACCC
GACAACACAG CGACGATTTG CCTCGCTTTT CTCACCCTGG GCTTGGGCCT GTATTCCTCG
CGTCGACCAC GGCTTGGCAA CGATGAACAT CGTCGAGCGG TCACTGGCAC AACACTCTGG
GTAGGTGCCT TTGGACTTTT CACCATTGGG ATTATCAACG GATCTCTGAC GTCCGGAACG
GGCCTATTCG TGACGCTTTG GTTGGTGCGA TGGTTCGGGT TGAGTTACAC CCGAGCTGTT
GCCCACACGT TGATTCTCGT CGGACTGGGT TGGAACGGTA TAGGCGCCCT CACCCTTGGC
CTAAAGGGTG ACATCCACTG GCAGTGGCTC CCCGCCCTCA TCGTTGGGTC ACTGATCGGC
GGCTATATCG GAGCGCATTG GTCGATCAAA CAGGGCGACA AGGTCGTGAA ACAAGCCTTC
GAAATCTTGG CCCTCATCAT GGGCTTTTCA CTCCTCGCCC GAGGCCTTCT GATCTGA
 
Protein sequence
MITEDLPVQL ALAVVALISN GLSAFAGGGA GLVQLPALIL LGLDFSTALA THKVASVALG 
VGAAGRHWRA SSLDRRLSAL VLCAGLPGVV IGANLVLAIP DNTATICLAF LTLGLGLYSS
RRPRLGNDEH RRAVTGTTLW VGAFGLFTIG IINGSLTSGT GLFVTLWLVR WFGLSYTRAV
AHTLILVGLG WNGIGALTLG LKGDIHWQWL PALIVGSLIG GYIGAHWSIK QGDKVVKQAF
EILALIMGFS LLARGLLI