Gene Syncc9902_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0930 
Symbol 
ID3741954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp919885 
End bp921987 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content57% 
IMG OID637771104 
Productoligopeptidase A 
Protein accessionYP_376940 
Protein GI78184505 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACACA CCTCCTCACC CCTTCTCCAA GGACAAGGTC TCCCCGAATT CGGCGCCATC 
ACCTCTGACC AGGTAAAGCA AGACATTCCG GTAATTCTGA GGCAAGTGGA TGAAGCCTTC
ACGGCCTATG AGAGTCGCCT TGAAGCCATC CTCAACAGCC AAACCGCCTT GGATTGGGCC
ACCGTGATGG GGCCCTTGCA GGAGTTTGGT GAGCGTCTTC GTTGGAGCTG GGGTGTGGTT
TCTCATCTGA ATGGAGTTTG CAACTCTTCC GAACTCCGCA CCGCCCATGC GGAACAACAA
CCCGAGGTGG TGCGGCTTGG GAATCGCCTT GGACAAAGCC AGGTGCTGCA TTCGGCCCTG
ACCCGTCTCC AAGAGTCACC CGTCGTTGCA CTAACCCCCA CCCAATCACG AATTCTTCGC
TCTGAATTGC TGTCGATGCA ACACCGTGGG GTTGGACTCT GCGGCGATGA CAAAGCCAAA
TTCAACGAAG CCAGTGAACG ACTGGCAGCG CTCTCCACAC AATTTGGGAA TCATGTGTTG
GATGCCACCC AGCAATGGAC ACTGAAGTTG ACCTCAAGAG AGGAGGTCGC CGGGCTTCCT
CAACGGGCCC TTGAGGCCCT TGCATCCGCG GCAAAAGAAG CAGGCGACAG CGCTGCTACG
GCCGAGGCAG GCCCCTGGTT ACTTGGCCTC GACATGCCCC GATACCTTCC GTTTCTGACC
CATGCCAACA ACCGATCGGT GCGCGAAACG GCGTATCGGG CGCATGTGGG GCGTGCCAGC
AGTGGCGAGC ACGACAACCG CGCACTGATC GAGGAAATCC TCTCCCTAAG AGGGCAACAA
GCCACTCGAT TGGGCTATGC CCATTGGGCA GACGTGAGTC TTGCCAGCAA AATGGCGAAG
GATGTTGATG CCGTAGAGGG GTTGCTTGAG GAATTGCGGG TTGCTGCTTT TCCTGCTGCC
GAACGAGAGC TCGACGATCT CAAGGCCTTA GCGCAACGCC ACGGTGCGGC CGAAGCAGAA
GAACTTGCCC CTTGGGATCT CCCGTACTGG AGCGAAAAAT TACGCCAAGA GCGTTTTGAT
TTGGATCAAG AGGCGCTTCG TCCCTGGTTC CCATTGCCGC AGGTTCTTGA TGGCCTCTTT
GGCCTCTGCA ACCGCCTGTT TGATGTGGTG ATCGAAGCCG CCGATGGGGA AGCTCCGATC
TGGCATGAAG ACGTTCGTTA CTTCCGCGTT CAACGGCAAG ACGGCACCCC ACTCGCCTCG
TTTTATCTCG ATCCCTACAG CCGACCAGCC AGCAAACGCG GTGGGGCCTG GATGGATGAA
TGCCTTGGAC GGAGAACGAA CCCCGACGGC AGCCGAGTGC TCCCGGTTGC CTACCTGATT
TGCAATCAAA CCCCTCCAGT TGGAGACACT CCGAGCTTGA TGAGCTTCGA GGAAGTGGAA
ACGCTCTTCC ATGAATTTGG CCATGGTTTG CAGCACATGC TCACCACGGT TGATGAACCT
GAAGCAGCTG GCATCAGCAA TGTGGAATGG GATGCCGTTG AGCTCCCAAG CCAGTTCATG
GAGAATTGGT GCCTTGATCG CGCCACCTTG ATGGGTATGG CACGCCATTG GCAAACCAAC
GAACCGTTAC CGGAGGAAGA ATTCCAAAAA CTGCGCAGAA GCCGCACATT TAACGCTGGG
CTGGCAACCC TTCGCCAAGT GCATTTCGCC CTGAGCGATC TTCGCCTTCA CAGCCGCTGG
ACTCCGGAAC TTGGCATCAC TCCTGATGCG TTACGCAGGG ACGTTGCAAC CACCACAACG
GTGATGGAAC CCATCCCGGA AGATCAATTT CTCTGCGCCT TTGGCCACAT TTTTGCCGGT
GGATACTCCG CTGGGTATTA CTCCTACAAA TGGGCTGAGG TCTTAAGCGC CGATGCATTC
GCGGCCTTTG AGGATGCTGG CCTCGACGAT GAACAGAAGG TTCAGTCCAC TGGAGCTCTC
TTCCGAGACA CTGTTCTCAG CCTGGGTGGA AGCCGCTCAC CGTCCGAGGT GTTCGAAGCC
TTCCGCGGGC GCCCTGCAAG CACCGATGCA TTAATCCGAC ATTCCGGCCT GGTGAACGCC
TAA
 
Protein sequence
MAHTSSPLLQ GQGLPEFGAI TSDQVKQDIP VILRQVDEAF TAYESRLEAI LNSQTALDWA 
TVMGPLQEFG ERLRWSWGVV SHLNGVCNSS ELRTAHAEQQ PEVVRLGNRL GQSQVLHSAL
TRLQESPVVA LTPTQSRILR SELLSMQHRG VGLCGDDKAK FNEASERLAA LSTQFGNHVL
DATQQWTLKL TSREEVAGLP QRALEALASA AKEAGDSAAT AEAGPWLLGL DMPRYLPFLT
HANNRSVRET AYRAHVGRAS SGEHDNRALI EEILSLRGQQ ATRLGYAHWA DVSLASKMAK
DVDAVEGLLE ELRVAAFPAA ERELDDLKAL AQRHGAAEAE ELAPWDLPYW SEKLRQERFD
LDQEALRPWF PLPQVLDGLF GLCNRLFDVV IEAADGEAPI WHEDVRYFRV QRQDGTPLAS
FYLDPYSRPA SKRGGAWMDE CLGRRTNPDG SRVLPVAYLI CNQTPPVGDT PSLMSFEEVE
TLFHEFGHGL QHMLTTVDEP EAAGISNVEW DAVELPSQFM ENWCLDRATL MGMARHWQTN
EPLPEEEFQK LRRSRTFNAG LATLRQVHFA LSDLRLHSRW TPELGITPDA LRRDVATTTT
VMEPIPEDQF LCAFGHIFAG GYSAGYYSYK WAEVLSADAF AAFEDAGLDD EQKVQSTGAL
FRDTVLSLGG SRSPSEVFEA FRGRPASTDA LIRHSGLVNA