| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0699 |
|---|
| Symbol | |
|---|
| ID | 3744099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 709731 |
|---|
| End bp | 711029 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637770872 |
|---|
| Product | major facilitator superfamily multidrug-efflux transporter |
|---|
| Protein accession | YP_376711 |
|---|
| Protein GI | 78184276 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0364966 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGACC CTCTGCGGTG GTGGAACCAG TTTCCACTAG CGCTGAGAAA TGTCACCCGC
ATCCGACTCC TGGCATCCAT TGGGGCCGGT GGGGTGATCT TTATGACTCC GCTGATTTTT
CATGCGATCA ATTTCTCAGC CAGCCAGGTT GGAAGTGGTC TGGCCCTTGC AGCACTGATC
GGCACTGTGG TGCGTTTGAT CAGTGGTGTT CTGATCGACC GAGGGTTGCG CTGCTCATGG
CCGATTCGGG TGACCACCCT GCTGGCCATC GCCGGCGATG TGATTTTGGT GCAGGCGAAC
GATTATTCGC ATTTTCTGTT TGGCCAAGTG CTGCTGGGCT GCGCTGCTGG CCTTTACTGG
CCAGCGATTG AGCTCGCCGT TCCGCTGAGC TGCGCCCAAG TGCCCTCAGG GCGGGGATAT
GCCCTCGTGC GCAGTGCTGA TGCCCTCGGC ATCGGATTTG GAGCCTTGAT CGGAACAGTG
GCATCCACCC AGGGAGCCTT GCGGATCGTC TACGGCGTTG AAGCCCTTTG CATGGGTGCT
GTGCTGATTT TGATCAGCCT TCGGCCGCTT CAGGACGACC GCCCTGCCCA TGGCTCAAGC
CAAGTTGTCG AGAAAACCAC ATCCCGCGGA GTTCCCGCAA CGCCAACCTG GCTGCTGCCG
TTGTTGCCTG TGCTTGCCAC CAGCGTTGTG GCCACGGGCA TCCTGGCCCT CCAGCAAAGT
GCTTTGCCAC TTGATCTTGT CCAGGGAAGC CTTCAACGAC CCAGCCTCAC CGAGAGCCAC
AGCAGCGCGT TGATTGCCCT GCAATTAATT CTTCTGGTCA GCCTGCAGTG GCCAGTCGGT
CGATGGCTTT CAAACCGCAG CGTTGGCTTC GGTTTAAGCA TCAGCCTTGC CAGCTTCAGT
TTGGGGTGCG TCTTAATCGC TTTGTCGTCG CTGTTTACGG CCGGAACAGC ACTTGTTTTG
GTGAGCTTGC TGCCGATGGC TTTTGCCCAA GCAGCTTTCC TTCCCACAGC CACTGAAGCC
GTTATCGAAG AGACACCTCC AGAGCATCGT GGGCTCGCGA TGGCCCTCTT TTCGCAGTGC
TTCACTGTGA GTGCGATCGT TGCTCCCCTG CTTGGTGGCG CCATGCTTGA TCACCTCAAC
AACGGGCTGC TGCTTTGGCT CTTGATGGGA GGTGCTTGCC TGGCAATGCT TCCAGCACTG
CGCAACTTGC GGCCCCGCTT CACAGCGGAT GGATCATCCT CAGAACGGAA CTCCCAAGTT
GAGGTTCAAG GTGCAGAAAA AACCTTATCA ATGCTGTAG
|
|---|
| Protein sequence | MPDPLRWWNQ FPLALRNVTR IRLLASIGAG GVIFMTPLIF HAINFSASQV GSGLALAALI
GTVVRLISGV LIDRGLRCSW PIRVTTLLAI AGDVILVQAN DYSHFLFGQV LLGCAAGLYW
PAIELAVPLS CAQVPSGRGY ALVRSADALG IGFGALIGTV ASTQGALRIV YGVEALCMGA
VLILISLRPL QDDRPAHGSS QVVEKTTSRG VPATPTWLLP LLPVLATSVV ATGILALQQS
ALPLDLVQGS LQRPSLTESH SSALIALQLI LLVSLQWPVG RWLSNRSVGF GLSISLASFS
LGCVLIALSS LFTAGTALVL VSLLPMAFAQ AAFLPTATEA VIEETPPEHR GLAMALFSQC
FTVSAIVAPL LGGAMLDHLN NGLLLWLLMG GACLAMLPAL RNLRPRFTAD GSSSERNSQV
EVQGAEKTLS ML
|
|---|
| |