Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0628 |
Symbol | fumC |
ID | 3742631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 637103 |
End bp | 638500 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637770800 |
Product | fumarate hydratase |
Protein accession | YP_376640 |
Protein GI | 78184205 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.390858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGAT CGTTCCGCAC CGAGCACGAC AGCCTTGGTC CTGTCGAAGT CAGTGACGAC GCCCTCTGGG GTGCTCAAAC GGAACGCTCT CTTCGCAATT TTGCGATCAG CAATGAGCAG ATTCCCGTTG AACTGATCCA TGCGTTGGCC TTAATCAAAC AAGGCTGTGC AGCCGTCAAC GCGCGTCATG GCGTGCTCAG CCAAGAGCTC GCCGACATGA TCACCTCCGC AGCCAACGCC ATTGCAACGG GAAAGCATGA CGATCAATTC CCCCTCAAGG TCTGGCAGAC GGGGAGTGGC ACCCAAACGA ACATGAATGT GAATGAGGTG ATCAGCAACC TGATTTCCCG TCGCGAAGGG ACGCCCCTCG GTAGCCATCA GCCGGTTCAT CCCAATGATC ATGTGAATCG CTCACAATCC ACCAACGACG TCTTTCCTGC CGCGATCCAC GTAGCAGCGA CACAGCAGCT CACCCATTCA CTGCTTCCTG CTGTTCAAGC TCTGATTGAC GCGTTTGATC TCAAGGCCGA GGCTTGGTTT CCGATTGTCA AAATTGGCCG GACCCACCTT CAAGATGCAG TGCCCCTTCG CCTTGGAGAT GAAGTTTCGG CCTGGCGCGA TCAGCTCAAG CTTTGCCGGT CGTGGATTGA AGACAGTCTC ACCCCCTTGG CAGCGTTGCC CTTAGGGGGA ACTGCGGTGG GTACAGGATT GAATGCCCCC AAAGGCTTCA GTACGGATGT GGCGAAGGAG CTGTTTAGCG CCACCGGTTT GTCGTTCCAC CCCGCTGACA ATTTGTTCGC TGTGATGGCA GGTCACGATG CCCTGGTTCA TGCGATGGGG CAGCTGCGTG GATTAGCCGT GGCCTTGCTA CGCATCTCCA ATGACATTCG ACTGCTGGGC TGCGGACCAC GGGCAGGACT CGGGGAATTG CGACTACCTG CCAACGAACC AGGAAGTTCG ATCATGCCGG GAAAAATCAA CCCCACACAA TGCGAGGCCA TGGCCATGGT GTGCACCCAA GTGATTGGAT TGGATGCGGC GGTGGCTGCA GCAGGTGCTG GGGGTCATCT GCAGATGAAT GTGTTCAAGC CGCTGATCGG GTTCAACCTC CTCCAATCCA TTCGCCTGCT CAGCGATGCA ATCAACAGCT TTCGCCAAAA CTTGGTGGTT GGTCTTGAGC CCAACCACCA GCAAATCCAA GCGTTTGTGG AGCGATCGCT CATGCTCGTG ACAGCGTTAA CGCCTCGTAT TGGATACGAA AAAGCCAGCG CCATCGCACA ACATGCCCAC GAGCAAGGGC TGACGTTGAA AGAGGCAGCC CTAAAGCTGG GGCACATCAG CGCCTCTGAC TTCGATCAAT TAGTGGACCC GATCAAGATG GCAATCCCTC ACGAATAA
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Protein sequence | MTRSFRTEHD SLGPVEVSDD ALWGAQTERS LRNFAISNEQ IPVELIHALA LIKQGCAAVN ARHGVLSQEL ADMITSAANA IATGKHDDQF PLKVWQTGSG TQTNMNVNEV ISNLISRREG TPLGSHQPVH PNDHVNRSQS TNDVFPAAIH VAATQQLTHS LLPAVQALID AFDLKAEAWF PIVKIGRTHL QDAVPLRLGD EVSAWRDQLK LCRSWIEDSL TPLAALPLGG TAVGTGLNAP KGFSTDVAKE LFSATGLSFH PADNLFAVMA GHDALVHAMG QLRGLAVALL RISNDIRLLG CGPRAGLGEL RLPANEPGSS IMPGKINPTQ CEAMAMVCTQ VIGLDAAVAA AGAGGHLQMN VFKPLIGFNL LQSIRLLSDA INSFRQNLVV GLEPNHQQIQ AFVERSLMLV TALTPRIGYE KASAIAQHAH EQGLTLKEAA LKLGHISASD FDQLVDPIKM AIPHE
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