Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0617 |
Symbol | gidB |
ID | 3742620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 626508 |
End bp | 627239 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637770788 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_376629 |
Protein GI | 78184194 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGATG CCACACCGGG AGCTGAATAT TGGACGGCAC TCGGTTGGCA ACCGTCGACG GAGCAAGTGG ATCAGCTTGC AACGCTGCAA ACCCTGTTGC GGGAATGGAA CGAGAAAGTC AACCTCACCC GACTTGTGGA GGGCGATGAC TACTGGATCA ATCAAGTGTT TGACAGCTTG TGGCCCTTGG CTCATGAGTT AAAAACACCT CATCAACCCA GAACGTGCAT TGATGTCGGC ACAGGTGGTG GGTTTCCAGG ATTAGCGATC GCCATTGCCT TGCCGGGTTC GCACATGACA CTGCTGGACT CTGTGGGCCG CAAAACGGCA GCGGTGGAGG CGATGGCCAG CAGGCTTGGC CTCGCCGATC GCGTGGCCGT TCGCACCGAA CGCATCGAAA CGACCGGCCA TGATCGCGCC TGCCGCGGCC AGTTCGACCT CGCCATGGCT CGAGCAGTGG CGGCAGCGCC TGTGGTTGCG GAATACCTCG TGCCCCTTCT GAAACCCAAA GGGGAAGCAC TGCTGTTTCG GGGGCAATGG TCCGAGGAGG ACACCACAGA ATTCAGCTCC GTGATATCAC CGCTCAAGGC TCAATTGACT GGCGTACAGA CGTGTCAACT GCCGGCCAAG CGCGGCATCC GTCACCTCTT GCGGGTGCAG CCCATTGGTT CGTGTCCATC GTCCTATCCG CGGGCCGTGG GTATTCCTAG CCGTACACCG CTGGGCTCCT GA
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Protein sequence | MADATPGAEY WTALGWQPST EQVDQLATLQ TLLREWNEKV NLTRLVEGDD YWINQVFDSL WPLAHELKTP HQPRTCIDVG TGGGFPGLAI AIALPGSHMT LLDSVGRKTA AVEAMASRLG LADRVAVRTE RIETTGHDRA CRGQFDLAMA RAVAAAPVVA EYLVPLLKPK GEALLFRGQW SEEDTTEFSS VISPLKAQLT GVQTCQLPAK RGIRHLLRVQ PIGSCPSSYP RAVGIPSRTP LGS
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