Gene Syncc9902_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0612 
Symbol 
ID3742654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp623478 
End bp624290 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content58% 
IMG OID637770783 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_376624 
Protein GI78184189 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.96054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGACG ATCGAAGCCA ACAACGGGAT CGAGGCCCCG CCAGCCTGTC GTTGGATCCA 
GATCTATTGG CGCGCGAGCT GGCTGCTGAA GAAAGCCTTG ATCCGCTCGA TGCGTTTGAG
CCCGACGTAG CAGTTGATGA TGCTTCGCCA TCGATTGCTT TGGCCTGCGA TCAGGGCCTG
CTCGCCCTCC GTGGCAACCA CGACCAGCGC CTGCAAGGGC TGCAAGTGTT CTGTGAACAT
CGCGATCCCA GGGCGCTTCC CCTGTTGCTT CCCCTTCTGC AACGCCCTTG CCCAGTGGAG
CGGATGAGTG CGGTGTATGC CCTAGGTCGT AATCCGTCGC CGCCGGCGGT GGAATCGCTG
CTACGCCTTT TGCAGGTGGA TAGCAATGCC TACGTCCGCA AAGCAGCAGC TTGGAGCTTG
GGGAATTATC CCGATGCGCC GATTCTGAAT CCCCTGATTC ATGCCCTGCA AACCGATGTT
GCTGCGGTTC GGCTGTGGTG CCCTGGATCC TTGGCTGAGT CGGGTAGCCG TTCGCCTGCA
AAAGCGGATC CGGCGGCGAG TCAATTAGTG GCCAGCCTTC AAATCGATAG TGAACCGGTG
GTTCGTAGTA ATTGCATTTG GGCTTTGGGC CGTTTGATGG ATCATTTGGT TGAGCCTCGT
CAGCAGGAGA TCGTTGAAGT GCTGGTGGAG TCGTTGTTGT ACGACGGTGA AAGTTCCGTA
CAGGACGAGG CTCGAACCGC CCTTGAGCAG CTGGAAGACC CCATGGTTTT AGAGCGCCTC
CAGACCTTGA TGAACGATGG ATTTCTGATC TAG
 
Protein sequence
MTDDRSQQRD RGPASLSLDP DLLARELAAE ESLDPLDAFE PDVAVDDASP SIALACDQGL 
LALRGNHDQR LQGLQVFCEH RDPRALPLLL PLLQRPCPVE RMSAVYALGR NPSPPAVESL
LRLLQVDSNA YVRKAAAWSL GNYPDAPILN PLIHALQTDV AAVRLWCPGS LAESGSRSPA
KADPAASQLV ASLQIDSEPV VRSNCIWALG RLMDHLVEPR QQEIVEVLVE SLLYDGESSV
QDEARTALEQ LEDPMVLERL QTLMNDGFLI