| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0610 |
|---|
| Symbol | |
|---|
| ID | 3742652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 621529 |
|---|
| End bp | 623292 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637770781 |
|---|
| Product | sodium/solute symporter family protein glucose transporter |
|---|
| Protein accession | YP_376622 |
|---|
| Protein GI | 78184187 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.922091 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCAG TCGACTGGCT TCTTCTTGGC CTGTACCTAC TGCTGACATT TCTGTTGGGC
CTATGGCTTG CCCGCCGCAA TCGTGGTCAA GAGGATTACT TCGTCGCAGG CCGGCGTCTG
AACGGCTGGT TGGCCGGCGC ATCCATGGCG GCGACAACCT TTTCGATTGA TACCCCGCTG
TACATCGCAG GACTCGTTGG TAGTCGTGGC TTGGCGGGCA ACTGGGAATG GTGGAGCTTT
GGCCTGGCCC ACGTTGCGAT GGCGGTGGTG TTTGCGCCGC TTTGGCGCCG GAGCGGAGTG
TTAACCGATG CGGCCTTCAC TGAATTGCGC TATGGCGGTG CTGCTGCTGC CTGGCTTCGC
GGGATCAAGG CCTTTCTTTT GGCGTTGCCC GTGAACTGCA TTGGGATCGG TTACGCGTTT
CTGGCGCTGC GAAAGGTGGT GGAAGCGTTG GGGATCGTGC GCGGTGAGCC GAGCTTTCTG
GGGCTGTCCG ACACCGTGTG GCTGCTCGCA ATTGTTGCCT TGTTGGTGGT CAGCTACACG
GTGGTTGGTG GGCTGTGGGC GGTGGTGATG ACTGATTTGG TGCAGCTCGT GCTCGCCTTG
CTGGGTGCCT TGGCGGTTGC TGTCGCTGCT TTGCATGCAA CGGGCGGTAT GGCATCACTG
CTCGATCAAC TTCAAGCCCT GAATCGACCT GAATTGTTGT CGTTGGTTCC TTGGACTTGG
GACGAGAAGG GCTTCACCTG GCTCGATGGA GCAGGGATCA GTGTGCCGAT GTTCACCGCT
TACATCGCTG TGCAGTGGTG GAGTTTTCGT CGCAGTGATG GCGGCGGTGA ATTCATCCAA
CGCATGCTGG CCACCCGTGA CGAACAGCAG GCACGGCTAG CTGGCTGGGT TTTTCTGGTT
GTGAACTACT TGATTCGCAG CTGGCTCTGG GTGGTGGTGG CTTTGGCTGC CCTCGTTTTA
TTACCTGCCC AGGCGGATTT AGAGCTTGGT TATCCAAAGT TGGCGGTTGA TCTCTTGCCT
CCTGTGGCGC TTGGGCTGGT GGTGGTGTCC CTCGTTGCCG CTTTTATGAG CACCGTGAGC
ACGTCGGTGA ACTGGGGCGC CAGTTACCTC ACCCACGATC TCTACGAACG TTTCATTCGG
CCCCAAGCAG GCCCACGGGA ATTGCTTTTG GTTGGACAGG CCACCACGGT ATTGCTGCTC
GTGCTTGGCG TGATGACGGC CTTAGTGAGC AACAGCATCG GGTCGGTGTT CCGACTCGTG
ATTGCCATTG GCTCCGGTCC AGGGGTGGTG TTGGTGTTGC GCTGGTTTTG GTGGAGGGTC
AATGCTGCTG CTGAGTTGTC CGCGATGCTC TGCGGCTTTC TCGTTGGCGT GCTCACCTCG
ATCACCCCTT TGGTGCGCAT CGATGATTAC GGCGTGCGCC TGGCCGTGAT CACAGGGGTT
TCCGCTGCCG TATGGCTCAC CGTGATGTTG TGTACTCCTC CGGAATCTGA GGCTGTACTT
GAGCGATTTG TGCGCCAGGT GCGACCGCCG GGTCCTGGTT GGGCCCACCT GCGTCGCCGT
TTTGAGGTCA CCCCGATTGA AAGCTTCCCA GTGATGCTTC AGCGTTTTGT ATGGGCTTGT
GGGCTGTTAT TCGGGGGATT GTTGGGCACC GGCGGATTCC TGCTGCATCA ACACATCACC
GGCTGGTGTG GCCTCAGCGT GCTTGTGGTG TCATTTCTGG TCTTGCGTCG GCCAGCGCTC
GCCGTCCAAT CATCATCAGA ATGA
|
|---|
| Protein sequence | MAAVDWLLLG LYLLLTFLLG LWLARRNRGQ EDYFVAGRRL NGWLAGASMA ATTFSIDTPL
YIAGLVGSRG LAGNWEWWSF GLAHVAMAVV FAPLWRRSGV LTDAAFTELR YGGAAAAWLR
GIKAFLLALP VNCIGIGYAF LALRKVVEAL GIVRGEPSFL GLSDTVWLLA IVALLVVSYT
VVGGLWAVVM TDLVQLVLAL LGALAVAVAA LHATGGMASL LDQLQALNRP ELLSLVPWTW
DEKGFTWLDG AGISVPMFTA YIAVQWWSFR RSDGGGEFIQ RMLATRDEQQ ARLAGWVFLV
VNYLIRSWLW VVVALAALVL LPAQADLELG YPKLAVDLLP PVALGLVVVS LVAAFMSTVS
TSVNWGASYL THDLYERFIR PQAGPRELLL VGQATTVLLL VLGVMTALVS NSIGSVFRLV
IAIGSGPGVV LVLRWFWWRV NAAAELSAML CGFLVGVLTS ITPLVRIDDY GVRLAVITGV
SAAVWLTVML CTPPESEAVL ERFVRQVRPP GPGWAHLRRR FEVTPIESFP VMLQRFVWAC
GLLFGGLLGT GGFLLHQHIT GWCGLSVLVV SFLVLRRPAL AVQSSSE
|
|---|
| |