| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0571 |
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| Symbol | |
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| ID | 3742898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 575958 |
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| End bp | 577316 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637770742 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_376583 |
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| Protein GI | 78184148 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.129264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGAGA TCGTCATGGC ACATCAACCG GCCCAAGCCG AGAGCTGCAC GGTTGATCCT
TTTGGCAGCG AAGTCTGCCT GCCGGATTCA ACCCCCGAGG AACCCGATAA GCCCAAGCGG
TCAAATCAAT CAAAGAAGTC GAACAAGCCA GACAAGTCCA AACGAATGGT GATCGTTCCG
TCGTGCTTTG GGCCCTGTAC TCAATTCCCG CCTGCTCCGC CGTATCGGCA ATTCCAGGAG
GTGATGGAGG AAGCCGCTCT TAAAGCCACA CCGGACGCCA CGCCCGAGCC ACGCCCCGCT
GAACCACTCC GCCCGCTCTG GTTCAAAAGC GATCAGCTCG ATGACGTTGA AGCAGAGACA
TACCTCGAGC GGACGCTCGA TCGCAACGAC ATGGCCCAGC TCAACGCCGT TGGCATCGAA
GCCGATACCG ATGCAGATGG CATGGTCATC ACGGTGGACG GACTGAGCTA CGGGGAGGTT
TTGGAGCCCC ATGGCTTGCT GTTCACCAAC GAGGTGAATG AGCCCGGGCT GAATGCTTGG
GTGCGCGGCT TTGGCGGCGG TAGTAGCAAC GGTGCCGCTG GCGATCGCTA CGCCAACTTC
AGCAATGGCG GCAGCCAGAT CGGCTTCGAC ATTCCCATCA ACGATGAAAC CCGGATCGGC
CTGTTTGGCA CCTATGCGGT GATGAACGGC ACAGATGGTG CACGCGGCAG CTGGGATAGC
GATGGTTGGG GTGGTGGTGC CTACGCCGAG TACTGGACCA GCGACTTCTA CTTGCGCGGC
ATGGTCAGCG CCGGCGGCTA TGACGGTGAG CATCGCCGCA AGATCGATGG TGAAACCGCC
AAGGGAGACC GAAGCGGCAA TTCCTGGACT GGCGTGCTCA ACATCGGTGC ACCACTACAA
AGCGGTGACT GGATCATCGA ACCTCAGGCC CAACTGAGTT ACACCAACAC CAGCCTCGAC
AAGTTCAGCG AACACGGCGC CAACCGGCGT GATCGTCTCC GCTTCCATGA GATGGAAGTC
GACCAACTGG GAAGTGAGCT CTCCGTGAAG TTCGCCATTC CCATCCGTGA TGGCGAACGA
TCATTACTCT TACCCTCGCT GCGGGTGGGC TGGGCCGCCG ACTGGGGGAT GAGCGGTGAC
CACCAAAAAG TGAGTTACCT CGAATCTGGC AAGAGCCAAC GCTGGGACGT GAATGGCAAC
GACGACCATG CCGCCCTCGT GGAACTGGGC CTCGACTACA CCACCTTCAA CTTCCAAGAC
ACCTCGATGG GGGTGTACGC CCGTGGTGGA GGGTTGCTCT GGGCTGGCAA TCGTGGCACC
AGTTGGCAAG TGCAAGGAGG CTTGAACTTC AAGTTCTGA
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| Protein sequence | MLEIVMAHQP AQAESCTVDP FGSEVCLPDS TPEEPDKPKR SNQSKKSNKP DKSKRMVIVP
SCFGPCTQFP PAPPYRQFQE VMEEAALKAT PDATPEPRPA EPLRPLWFKS DQLDDVEAET
YLERTLDRND MAQLNAVGIE ADTDADGMVI TVDGLSYGEV LEPHGLLFTN EVNEPGLNAW
VRGFGGGSSN GAAGDRYANF SNGGSQIGFD IPINDETRIG LFGTYAVMNG TDGARGSWDS
DGWGGGAYAE YWTSDFYLRG MVSAGGYDGE HRRKIDGETA KGDRSGNSWT GVLNIGAPLQ
SGDWIIEPQA QLSYTNTSLD KFSEHGANRR DRLRFHEMEV DQLGSELSVK FAIPIRDGER
SLLLPSLRVG WAADWGMSGD HQKVSYLESG KSQRWDVNGN DDHAALVELG LDYTTFNFQD
TSMGVYARGG GLLWAGNRGT SWQVQGGLNF KF
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