| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0554 |
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| Symbol | |
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| ID | 3743103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 560948 |
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| End bp | 563167 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637770725 |
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| Product | chloroplast outer envelope membrane protein-like |
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| Protein accession | YP_376566 |
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| Protein GI | 78184131 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGAC GTACTCGCCG TTCCTCGGTT GCCATCCGTC GCGGAGTCTT GGGTCTCGTA
CTGGGTGTTC CGTTAATAAG CCAACCGCTT CAGGCTCAGC CTTCAGAACC TGTTGGTGAT
CTAGCTCCTG ACGAGACCAA CATTGAAATG GTTGATATTC AACCTGGGGA GATGGAAGCT
CCTGCGGTTG AAATGGTCCA AGTGGAGCAA CCACGGGTCC TCATCTCTGA GGTCACGATT
GAAGGACTGT CGGGGCACCC AGAGGAAGAT CGTCTGCAGC TGTCTGCCTA CGACGCCATG
CAAGTACGTC CTGGCAGCCG AGTTACTCGA GATGAACTTC AGAACGACCT CAACGCGATT
CAGTCGACGG GTTGGTTCTC CGATGTGCGA ATTGTCCCCG AGAACGGTCC CCTTGGCGTT
CGGGTAATTG TGCAGGTGGA ACCATTCCCA CCGCTGACAA GTGTGGAGTT GAACCCTGTT
TCCGAAGAGT TGCCAACCAC TGTGTTGGAG GAGACCTTCG CTTCGGACTA TGGGCGCACT
CTGAACCTGA ATGATCTTCA GCAACGGATG AAAACGTTGC AGGACTGGTT TGCTGCTGAG
GGTTACTCAT TGGCACGGAT CACTGGCCCA GAACGGGTGA GTCCTGATGG AGTTGTTTCG
TTGAAACTGA CCCAAGGTCG TGTTGCTGAC GTTGAGGTGA AATTCCTTAC CAAAGATGGT
GATGACGTTG ATGAAAATGA CAATCCAATT AATGGAAAGA CCAGGGATTG GGTGATCACT
CGAGAAATTT CGATCAAGCC GGGTGATGCA TTCAACCGCA ACATGCTTGA ACGGGATATC
AAGCGGCTGT ACGGAACGCA GTTGTTCAGC GATATCAAAG TTACTTTGAA GCCATTGCCT
GAGCAGCCTG GTGAAGTGGT GCTTGTTCTT GGGATTGTTG AACAATCCAC GGGCCAGGTT
TCTGGTGGAT TGGGATATAG CCAATCTCAG GGTGTCTTTG GTCAGGTTCA GCTTCAAGAC
ACCAACCTGT TTGGGCGAGC TTGGAACCTT GGTTTGAATG TGACCTATGG ACAATATGGA
GGGTTGTCAA ACCTCACCTT TACGGATCCG TGGATATACG GTGATAACCA TCGAACTGGA
TTCCGCGGCT CGCTTTTCTT GAGTCAACAG GTTCCCCAGG TTTTCCAAAG TGAAGACAAT
GGAAATATTC GTACGCTGAA AGATTACGAG GACAATGGTG GCCGCAATGC CTATGAAACT
GGCCGTAAAT ATGGTTTTAG CGATAATGAC AAAGTCCCCG GCTCTGTCAA CAAGGCAGAC
GATGAATATC CCAATAAAAG TTGGTTTAAC TACGAAGGCG ATTCCATTGC ACTTCGCAAG
GTCGGCGGAA ATTTTGCCTT CACACGCCCT CTTAATGGTG GCGATCCATT CAAGGATGTT
CCCTGGCGAG TGCTTGCAGG AATGTCGTTC GAGAATGTAA GGCCAATCAA TTTTTCTGCA
GATTCCCGAC CTTATGGTGT GGCCTCTCGG AAAATTAAGA GCGGAAAAGT TAAAAATAAG
GATATTGTGT GTATCTCTTA CAATTGTGCC GATAGTAATT ATCTAACTTC CTTCCGTTTT
GCTGCCACCT ACAATTCATA TAACGATCCA AGTAACCCCA CGAGCGGAAG TTTTTTCACC
GCTAGTACTC AGCAATTTAT TGGAATTAAC GAAGATTCTC CAACCTTCAA CAAACTGCGC
ACGAGTTATA CCCAATTCTT CCCTGTGGAT TGGTTGAAGC TACACAAAGG ATGTCGACCC
AAGCCCGGTG AAGCGGCTGA TTGCCCCCAG GCGATTGGAG TTCAGGTCAA AGCCGGTGCT
GCTATCGGTG ATATGCCTCC CTACGAAGCG TTTTGCTTGG GCGGCTCCAA TTCGATCCGT
GGTTGGTACG ACTGTGACCT TGCCGTTGGT AAAGCGTTTG GTGAGATCAC CCTTGAATAT
CGCTTCCCAC TGATCAGCAT TTTCTCTGGT GAGGTGTTTA TGGACGCCGG AACAGACTTT
GATACGCAAA AGGATGTTCA AGGCAAGCCT GGATTGCTTC TCAATAAAGA CGGTTCCGGT
GTTTCTGTTG GTACTGGCGT GATTGTGAAA ACACCGGTGG GCCCGTTGCG TCTAGAAGTC
GCTACGAAAG ATTTCACGGA CGATTACCGC TTCAATTTGG GAATTGGCTG GAAGTTCTAG
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| Protein sequence | MTRRTRRSSV AIRRGVLGLV LGVPLISQPL QAQPSEPVGD LAPDETNIEM VDIQPGEMEA
PAVEMVQVEQ PRVLISEVTI EGLSGHPEED RLQLSAYDAM QVRPGSRVTR DELQNDLNAI
QSTGWFSDVR IVPENGPLGV RVIVQVEPFP PLTSVELNPV SEELPTTVLE ETFASDYGRT
LNLNDLQQRM KTLQDWFAAE GYSLARITGP ERVSPDGVVS LKLTQGRVAD VEVKFLTKDG
DDVDENDNPI NGKTRDWVIT REISIKPGDA FNRNMLERDI KRLYGTQLFS DIKVTLKPLP
EQPGEVVLVL GIVEQSTGQV SGGLGYSQSQ GVFGQVQLQD TNLFGRAWNL GLNVTYGQYG
GLSNLTFTDP WIYGDNHRTG FRGSLFLSQQ VPQVFQSEDN GNIRTLKDYE DNGGRNAYET
GRKYGFSDND KVPGSVNKAD DEYPNKSWFN YEGDSIALRK VGGNFAFTRP LNGGDPFKDV
PWRVLAGMSF ENVRPINFSA DSRPYGVASR KIKSGKVKNK DIVCISYNCA DSNYLTSFRF
AATYNSYNDP SNPTSGSFFT ASTQQFIGIN EDSPTFNKLR TSYTQFFPVD WLKLHKGCRP
KPGEAADCPQ AIGVQVKAGA AIGDMPPYEA FCLGGSNSIR GWYDCDLAVG KAFGEITLEY
RFPLISIFSG EVFMDAGTDF DTQKDVQGKP GLLLNKDGSG VSVGTGVIVK TPVGPLRLEV
ATKDFTDDYR FNLGIGWKF
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