Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0542 |
Symbol | |
ID | 3743091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 549483 |
End bp | 550229 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637770713 |
Product | hypothetical protein |
Protein accession | YP_376554 |
Protein GI | 78184119 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.108805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGCC ACAGCAAATG GTCACAGATC AAGCGCACCA AAGCGGTGGT TGATTCCAAG CGCGGGGCGC TATTTACCCG CCTTGGACGA GAGATCATGG TGGCCGCAAG AGCTGGGAGC GACCCGGCTG GCAATTTTCA ACTGCGAACC GCGATCAACA AGGCCCGTGC GGCAGCGATG CCGGCTTCCA ACATTGATCG AGCGATCGCC AAGGGATCAG GCCAAGGCGG GGAAGGAGCT CAACTCGAGG ACGTCCGCTA CGAGGGATAC GGCCCTGGCG GTATGGCCGT GATGGTTGAA GCCCTTACCG ACAATCGCAA CCGCACGGCA GCAGATTTAA GGCTTGCCTT CAGCAAAAAC GGCGGAAACC TCGGCGAGAA CGGATGCGTG GCCTACCTCT TCGAACATCG CAGCGAGGTG AGTATTAAAA CGGAGGCCGG TAGCGAAGAG CGCTTATTGG AGAGCCTGCT CGATCTTGAT GCCGATGGCT ACGAGTTGAA CGATGAAACA ACGGCCACCA TTTTTGGACC ATTTGCAGGC CTTGAAGCCC TGCAAGATGG CTTGCGTCAG CAAGGGTGGG ATGTCAAAGA GTGGGGGCAC CAATGGGCCA CCACCACCAA CGTTTCGATT AGCGATCCCG CTACTGCCCA GAGTTGCCTG AACCTGCTGG ATGCCCTGGA AAGCCTCGAT GATGTGCGGA GCGTTAGCGC CAATCTGGAG CTAGATACAA AGCTTGAGAT CAACTGA
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Protein sequence | MAGHSKWSQI KRTKAVVDSK RGALFTRLGR EIMVAARAGS DPAGNFQLRT AINKARAAAM PASNIDRAIA KGSGQGGEGA QLEDVRYEGY GPGGMAVMVE ALTDNRNRTA ADLRLAFSKN GGNLGENGCV AYLFEHRSEV SIKTEAGSEE RLLESLLDLD ADGYELNDET TATIFGPFAG LEALQDGLRQ QGWDVKEWGH QWATTTNVSI SDPATAQSCL NLLDALESLD DVRSVSANLE LDTKLEIN
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