Gene Syncc9902_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0542 
Symbol 
ID3743091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp549483 
End bp550229 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content57% 
IMG OID637770713 
Producthypothetical protein 
Protein accessionYP_376554 
Protein GI78184119 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.108805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGCC ACAGCAAATG GTCACAGATC AAGCGCACCA AAGCGGTGGT TGATTCCAAG 
CGCGGGGCGC TATTTACCCG CCTTGGACGA GAGATCATGG TGGCCGCAAG AGCTGGGAGC
GACCCGGCTG GCAATTTTCA ACTGCGAACC GCGATCAACA AGGCCCGTGC GGCAGCGATG
CCGGCTTCCA ACATTGATCG AGCGATCGCC AAGGGATCAG GCCAAGGCGG GGAAGGAGCT
CAACTCGAGG ACGTCCGCTA CGAGGGATAC GGCCCTGGCG GTATGGCCGT GATGGTTGAA
GCCCTTACCG ACAATCGCAA CCGCACGGCA GCAGATTTAA GGCTTGCCTT CAGCAAAAAC
GGCGGAAACC TCGGCGAGAA CGGATGCGTG GCCTACCTCT TCGAACATCG CAGCGAGGTG
AGTATTAAAA CGGAGGCCGG TAGCGAAGAG CGCTTATTGG AGAGCCTGCT CGATCTTGAT
GCCGATGGCT ACGAGTTGAA CGATGAAACA ACGGCCACCA TTTTTGGACC ATTTGCAGGC
CTTGAAGCCC TGCAAGATGG CTTGCGTCAG CAAGGGTGGG ATGTCAAAGA GTGGGGGCAC
CAATGGGCCA CCACCACCAA CGTTTCGATT AGCGATCCCG CTACTGCCCA GAGTTGCCTG
AACCTGCTGG ATGCCCTGGA AAGCCTCGAT GATGTGCGGA GCGTTAGCGC CAATCTGGAG
CTAGATACAA AGCTTGAGAT CAACTGA
 
Protein sequence
MAGHSKWSQI KRTKAVVDSK RGALFTRLGR EIMVAARAGS DPAGNFQLRT AINKARAAAM 
PASNIDRAIA KGSGQGGEGA QLEDVRYEGY GPGGMAVMVE ALTDNRNRTA ADLRLAFSKN
GGNLGENGCV AYLFEHRSEV SIKTEAGSEE RLLESLLDLD ADGYELNDET TATIFGPFAG
LEALQDGLRQ QGWDVKEWGH QWATTTNVSI SDPATAQSCL NLLDALESLD DVRSVSANLE
LDTKLEIN