Gene Syncc9902_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0481 
Symbol 
ID3742493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp498305 
End bp499501 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content57% 
IMG OID637770652 
Producthypothetical protein 
Protein accessionYP_376493 
Protein GI78184058 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.874719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGGCA GCATTGCTGA ATGGCTGATG AAAGAAGTCC AACCCAGTGA TGCCGCCACT 
CCAGTGGTGA GTGCTTTTTA TGACCGCTTC CCCTTCCCTG GGGATCCGCT TCAGGATGGT
CCACCTCCTG GGTACAACTG GCGTTGGTGC CACCGCAGCG TGTTGGCCTC CGTGCATGGC
GTGATCCCAG CGGGGCAGCA GCAGCCACGC ATCCTTGACG CGGGTTGTGG CACCGGCGTC
AGCACGGATT ATTTGTGCCA CCTCAATCCT GGCGCTGAGG TTGTTGCTGT TGATATCAGC
GATGGAGCCT TGGCGGTGGC GCGGGAGCGC CTGGAACGCT CCGAAGCTCG TCAGGGTGTT
CGTTCGTTAA GGCAAGAGCA GCGCAGTCTT TTGGATTTGG GAGATGAAAC GCCCTTCGAT
TACATCAACT CTGTTGGCGT GCTGCACCAT CTTCGGGAGC CAGAAGCAGG GCTTGCCGCC
CTTGCAGACC TCCTCGCTCC CCAGGGACTT CTTCATCTAT TTCTATATGC CGATGCAGGG
CGCTGGGAAA TCCACCGCAC TCAAAAAGCA CTGACACTGC TTCAGGCCGG AACCGGCGGA
GATGGCCTGC GTTTGGGCCG GAACTTGTTC GAGACTTTGC CTGAATCCAA TCGGTTGCGT
CGTCACCATG AGCAGCGCTG GTCTGTCGAC TGTGCTCCCG ATGCCAATTT TGCCGACATG
TATCTCCACC CACAGGAGAC CAGCTACAAC CTCGAACGTT TGTTTGCGTT CATCGAAACC
GCAGGCTTGC AGTTCGCTGG TTTCTCGAAT CCAGAGCTTT GGGATCCAGC TCGGTTGCTG
AACGGTGAGC TGTTGGAGAG GGCCCAAGCG TTACCCGTCT CTCAGCAGTG GTGCTTGATC
GAGCAACTCG ATCCAGACAT CAGCCATTTC GAGTTTTTCC TGTCGAAGGC TCCCATCACC
AAGAGTTCTC GAACCGACGA CGAGCTGGCT GCAGCAAAAG GCCTCCGGCA GCCTTGCTTG
TGGGGAGAGC CGGATCCCAT TCTTGGCCGG AATATGGAAC CAATCCAGCT CAGCGATGCA
GCGAAAGATT TGCTCCGCTG TGTCGATGCT CAGCCCGATG CAGCCCTGGG ATCGATGGGG
TCGCCAGACC TTTTAAGAGA TCTTGTTGAT CGTCAAATTC TTTTGTTGCG GGAGTAG
 
Protein sequence
MLGSIAEWLM KEVQPSDAAT PVVSAFYDRF PFPGDPLQDG PPPGYNWRWC HRSVLASVHG 
VIPAGQQQPR ILDAGCGTGV STDYLCHLNP GAEVVAVDIS DGALAVARER LERSEARQGV
RSLRQEQRSL LDLGDETPFD YINSVGVLHH LREPEAGLAA LADLLAPQGL LHLFLYADAG
RWEIHRTQKA LTLLQAGTGG DGLRLGRNLF ETLPESNRLR RHHEQRWSVD CAPDANFADM
YLHPQETSYN LERLFAFIET AGLQFAGFSN PELWDPARLL NGELLERAQA LPVSQQWCLI
EQLDPDISHF EFFLSKAPIT KSSRTDDELA AAKGLRQPCL WGEPDPILGR NMEPIQLSDA
AKDLLRCVDA QPDAALGSMG SPDLLRDLVD RQILLLRE