Gene Syncc9902_0464 details

Gene Information

• Locus tag: Syncc9902_0464
• ID: 3743845
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 480918
• End bp: 482936
• Gene Length: 2019 bp
• Protein Length: 672 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637770635
• Product: capsule polysaccharide protein KpsS-like
• Protein accession: YP_376476
• Protein GI: 78184041
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3562] Capsule polysaccharide export protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0858219
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGGTAGGG GACGGGCGCC GGCACTGGTG CAAGTGCGCA TTGATGGTCC AGTCCTCCTC 
TTGATGGGTC CGATTGGTCT GTTTTTTGCG CGGTTTTGCA ATTACCTCAG GGGCTGTGGC 
ATTCCCGTGA CCAAAGTGGC GTTCCCGTTA CGGGAATTTG GTTTCTCGTC TGAGGTGACG 
GTGCCGTTTC GCGGCGACAT GGAGGCGTGG CGTCCGTTTG TCCGACGTTT GCTCCAGGAC 
CGCGGCATTC GCCACATTTT TATGTACGGG GATTTCATCA TTCCCCACCG AATTGCGATT 
GAAGAAGCAC AGTCGCTCGG CATCGAAGCG TGGGTGTTTG AACTCGGCTA TCTACGCCCG 
AACTACATCA CGTTGGAGCG TGATCGAGTG AATGCTCGAT CCAATCTGAA TAAGCCAGTT 
TCGTTCTATC AGAATCTCCT CCCTGTCGAT CAACTGCCGC AAAACATCGT GCTGGATCCG 
GGATCGCGAT GGCGCAAAGC CTGGAAAGCA CCCACGTTTA TTCAGCATGC TTTCACCGAT 
TACCCAATTA TCGAAGGGGA GCACAAACTT CAGCCCTCTC CCCGTTTTTT GTGGTGCCAG 
GTGCGCGGCA GCTGGCGCTA CTGGCTGTAT CGCTGGACCG AGAGAGAGGT GAAACGGCGA 
CTGCTGGAGC ATGAGTCTTT TTTCCTGTCT GTCCTGCAGG TGTCGAGCGA TTCTCAAATT 
CAGATGGGTT CCCCCTACCG GGGCATGCAC GATTTCATCG AGGACGTGAT TCGCTCATTC 
TCCGAGCATG CCCATGCCTC GGATCGACTG GCTTTTAAAC ATCATCCGCG CGATCGGGGC 
TACAACCACT ACGGCCTCTT GATTGCCCTG TTGTCCCGCC GTTATGGCGT TGTCGGTCGG 
GTGCACTATT TCCACGATGG CCCCCTAAGC CGGTATCTAC GCACGTGTCG TGGGGTGATC 
ACGGTGAACA GCACGGTGGG CTTGCAAGCC CTGTTCCATG CGGTTCCCAC CAAGACGATG 
GGCAACACCT TTTACAACTT GGAAGGACTC ACCGATCAGA AGCCCCTCGA CGACTTCTGG 
CGTGATCCTC AGCCCAGTGA TCGGCCGCTT TTTTATCGCT TCTACAACCA TCTCGTGATG 
AGCACGCAGG TGAATGGCAA TTTCGATGGG GACTTCCCCT TTCGCACCAC CTTTCCGATC 
GGTCCGGAAG CCCGCCAGCT GGAGTCGCCT TCCCCGTTGC CCGCGTTGAA GGCGCCTTTG 
ATTCGGAATC CCTTGGCTTT GGGTGCCCGC ATGGTGTCTC GCATGGCATG GGCTGGCCTT 
GGCTTTGGGT TGTACGGCTT GCAACTACCT GCAGTGCTGC TCGGCCGACC GGACTGGGCG 
GCCCAATTGA TGACTTTGGC GTCTGCTGTC GCCCTAAGGG CCTTGGGTGT GCAAGTGGTC 
GTGGATGACA GCCAACCCTC TGAAAACCCT GGCACTCCCT TGGTGCATAT CTTCAATCAC 
CGCAGTCCGT GTGATGGCTT GGTGATTCAG GCCGTGCTCA AAATACCTGG CCTCACCACG 
GCGCAATTGC ATCTCAAATG GGTGCTGCCT GGTTATGCGG CCGCGGCGCG GAATGCCGGT 
TCAGCGGTGC TTGATCATCG ACAGCCCCAG TCCCGTCTGG CGGGGCTGAT GAGTGCTTCC 
ACGTTGTTGA GGGATCACGG TGAAATCATG ATTGCCCCAA ACGGATCGTT GGTGACCCCG 
ATTGAAGAGC GAGTCTCGTC TAGCGCTTGG ATGCTGGCCC AGCATTACGG CGGCAGCATT 
GTTCCATGGG TTTTTCGCTA CGAGGGATTG GATGGCGCTG TTGGTGCTCG CTACAAACCG 
CTGCGTTTGC TGTTGCGTCG TCTAACGGCA CCTCTGGGAA CGATTCACTG CCGTCGAGGG 
CGCTCTTCTG ATCTCCAACT TCCTCCAGAT CCCCGTGATC GTGATGGCTT TAGTCGAGCC 
GTGCAGCAGT ACTACAGGGC ACAGCAAGAA TCAGGCTGA 

 

Protein sequence

MGRGRAPALV QVRIDGPVLL LMGPIGLFFA RFCNYLRGCG IPVTKVAFPL REFGFSSEVT 
VPFRGDMEAW RPFVRRLLQD RGIRHIFMYG DFIIPHRIAI EEAQSLGIEA WVFELGYLRP 
NYITLERDRV NARSNLNKPV SFYQNLLPVD QLPQNIVLDP GSRWRKAWKA PTFIQHAFTD 
YPIIEGEHKL QPSPRFLWCQ VRGSWRYWLY RWTEREVKRR LLEHESFFLS VLQVSSDSQI 
QMGSPYRGMH DFIEDVIRSF SEHAHASDRL AFKHHPRDRG YNHYGLLIAL LSRRYGVVGR 
VHYFHDGPLS RYLRTCRGVI TVNSTVGLQA LFHAVPTKTM GNTFYNLEGL TDQKPLDDFW 
RDPQPSDRPL FYRFYNHLVM STQVNGNFDG DFPFRTTFPI GPEARQLESP SPLPALKAPL 
IRNPLALGAR MVSRMAWAGL GFGLYGLQLP AVLLGRPDWA AQLMTLASAV ALRALGVQVV 
VDDSQPSENP GTPLVHIFNH RSPCDGLVIQ AVLKIPGLTT AQLHLKWVLP GYAAAARNAG 
SAVLDHRQPQ SRLAGLMSAS TLLRDHGEIM IAPNGSLVTP IEERVSSSAW MLAQHYGGSI 
VPWVFRYEGL DGAVGARYKP LRLLLRRLTA PLGTIHCRRG RSSDLQLPPD PRDRDGFSRA 
VQQYYRAQQE SG