| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0388 |
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| Symbol | |
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| ID | 3742824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 401466 |
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| End bp | 403667 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637770559 |
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| Product | recombination factor protein RarA/unknown domain fusion protein |
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| Protein accession | YP_376402 |
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| Protein GI | 78183967 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.211044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGAATC AGGATCTTTT CGCCTTCCAC GGAGAACAAC AGCGCCGTCG GCTTGCACCA
CTGGCTGATC GCATGCGGCC TCGCACCCTG GAGGAATTCG AGGGGCAGCA GGGAATCTTG
GCGGAAGGTC GGCTCCTCCA ACGCGCGATC AAAGCCGACA GAGTTGGAAA TTTGATCTTG
CATGGCCCGC CTGGGGTGGG CAAAACGACC CTGGCCAGGA TTGTGGCGAA CCACACCCGC
GCTCATTTCA GCAATCTGAA TGCGGTGCTC GCGGGGGTGA AGGATCTACG TGCCGAAGTA
GATGCCGCAC AACAGCGGCT TGAGCGGCAC GGGCTGCGCA CAATTTTGTT TATCGATGAA
GTGCATCGAT TTAACAGCGC CCAACAAGAT GCCCTTCTGC CTTGGGTGGA AAACGGAACC
GTCACCCTGA TTGGCGCTAC GACAGAAAAC CCCTTCTTCG AAGTGAACAA AGCCCTCGTG
AGCCGTTCAC GCCTGTTCCG GCTTTTGCCC CTGGAACCCA AAGACCTTCA CCAGCTCCTG
CAACGAGCAC TCACAGACCA AGACCGGGGC TATGGCGAAC GCTCTGTGGT GCTGGACACA
GATGCCGCCA ACCATCTTGT CGATGTAGCA GGAGGAGACG CCCGCAGCCT GCTCAACGCT
CTCGAACTGG CGGTGGAAAG TTCTGAGCCA ACGACGGACG GAACCATCGC TATCAACCTC
GCCACGGCCG AGGAGTCGAT CCAACAGCGC GCTGTTCTGT ACGACAAACA AGGTGACGCC
CACTACGACA CCATCAGTGC CTTTATCAAG TCGTTGCGAG GCTCAGATGC CGATGCAGCG
TTGTTTTGGC TCGCACGCAT GGTGGAAGCC GGTGAAAATC CCCGATTCAT TTTCCGACGA
ATGTTGATCG CCGCTGGAGA AGACATCGGC CTAGCAGACC CCCAAGCGAT GGTGGTGGTG
GAGGCATGCG CTGCAGCCTT TGAACGGGTC GGACTACCAG AAGGGCTCTA CCCCCTCGCA
CAAGCAGCTC TATACCTAGC CGGAACGGAA AAAAGCAACA GCATTCTGGG CTTCTTTGAT
GCCCTTAAGA GCGTCCGTGA CGCCAACCGC CAGGACGTCC CCCCCCACCT ACGCGATGCC
AATCGAGACG GCGACGCCTT CGGAGATGGC GTGGGTTACC GCTATCCCCA TGCCTATGCG
GACCATTGGG TGGAACAGCA ATATCTGCCC ACAGCGCTGC AAGGCGAAGT GTTTTGGCAG
CCTGGGGCTC TGGGCTGGGA AGGACAACGG CGCGAACGAA TGGGTGCTCG CCGTGCAGCC
CAGCTCGCAG CCGCCGCTGA ACTTGCGTCT GATCAACCAC TTCTGCTCAG CAGTGGACCC
GACAGTCCCG GCCTAGAGCG CTGGATTCAG CGTCAACTCG GACAAGAGGG AGAACGGTTG
CATCAACTCC GCAAACGTCT TTGGGAGGGC GTCTCTTGGC AACGCCACGA TCGCGTTTTA
ATCCTTGGAG CCCGGTCGCT GATCTGGGCC CTTGATCCCC TACAGGCTGT TCCTGAGGGG
GGCGTCACCA TGCTCTGCAA CAGCACCGAC GATCGCCACC GCATCGAAGC CCAGATCCAA
CTACTTGACC CCGAACTTCG CCCCCAACTC CTCAGCGGTG GACTCGAAAC GTTGCAGGCG
AACCAGGCCT TTGAGTGGAT CGGTGGTCGC TTCAGCACCA CCGACCTTCA ACAGCTGAAT
TGGACTGACC TAGAGCACCA AATTCAAAAC CACTCCCATG GCGACACCAC CCTCCGTCTC
CTCACAACAA GGGCAGAAGC CGGACCGGCA GGAGCTCTAC TTCAAGCCAG CAGCAGCGAT
GCAGAGCTGG AGACACTCCT TCAAAAGGAG CAGTTATGGC TGGCCGCACA AACACAAGCC
CATCACGTCT TCGAAGCGGA AGGATGGAGT GGATCACAAG ACAGTTGGTT GGAAACCCTG
AACCTTCCAT GGGGGCCTGA CTTGGCAGAC CGCTGGCTCG CGGAGGGTTC CTCTTACCGC
GTCGCGATGG GAACCATTGA TCCGACGGTT CTGACCCTGC TTCGCCAACG TCTTGAGGGG
ATCGGACGCA GCGGTTTACG CCTTCCCATG CGTCACGAAC TTTTCATCGG ACGGCGCAAC
GCGTCCGTCA ATCAGCGCAA CGCGTCAACC GAAAAGGCAT AA
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| Protein sequence | MVNQDLFAFH GEQQRRRLAP LADRMRPRTL EEFEGQQGIL AEGRLLQRAI KADRVGNLIL
HGPPGVGKTT LARIVANHTR AHFSNLNAVL AGVKDLRAEV DAAQQRLERH GLRTILFIDE
VHRFNSAQQD ALLPWVENGT VTLIGATTEN PFFEVNKALV SRSRLFRLLP LEPKDLHQLL
QRALTDQDRG YGERSVVLDT DAANHLVDVA GGDARSLLNA LELAVESSEP TTDGTIAINL
ATAEESIQQR AVLYDKQGDA HYDTISAFIK SLRGSDADAA LFWLARMVEA GENPRFIFRR
MLIAAGEDIG LADPQAMVVV EACAAAFERV GLPEGLYPLA QAALYLAGTE KSNSILGFFD
ALKSVRDANR QDVPPHLRDA NRDGDAFGDG VGYRYPHAYA DHWVEQQYLP TALQGEVFWQ
PGALGWEGQR RERMGARRAA QLAAAAELAS DQPLLLSSGP DSPGLERWIQ RQLGQEGERL
HQLRKRLWEG VSWQRHDRVL ILGARSLIWA LDPLQAVPEG GVTMLCNSTD DRHRIEAQIQ
LLDPELRPQL LSGGLETLQA NQAFEWIGGR FSTTDLQQLN WTDLEHQIQN HSHGDTTLRL
LTTRAEAGPA GALLQASSSD AELETLLQKE QLWLAAQTQA HHVFEAEGWS GSQDSWLETL
NLPWGPDLAD RWLAEGSSYR VAMGTIDPTV LTLLRQRLEG IGRSGLRLPM RHELFIGRRN
ASVNQRNAST EKA
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