Gene Syncc9902_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0352 
Symbol 
ID3743566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp361132 
End bp362358 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content58% 
IMG OID637770522 
Productputative multidrug efflux MFS transporter 
Protein accessionYP_376368 
Protein GI78183933 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.986848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCGTTC TTCAACTGCA GCCCGAGCAG CAACGCCGGC TGTTTTTAGT CGCCTCTGGA 
GTGAGTACAG CGGGGTCTTT TGCAGGGATC ACTGCCAAAG GCTGGATCCT GATGGATGGC
AGCGCCGATC CATTTCTACT CGCTCTAAAT TTTGCAGCGC TGGCGCTACC GACGCTCATC
ATTAGTGGCC CCGCGGGGGT GCGCACCGAT CGTGTTGGCT GTGAACGGGT GCTTGTGCAG
TCGCAATGGG CCCTCTTGGC CGCAGCTGGA CTTGGGGCCC TGGCCATACC CCTCTTTGAA
GGCATGGCGC AGGTGGTTTT ACTCCTCAGC AGCACACTGC TCGTTGGAAT CGCAGGAGCC
TATGAACTCA CAGCCCGAAA TAAGTACTGT TCAATCCTCG TGGGGCCGAA TCAATTGGGG
AGCTATCTCA CAAGCTTCTC CGTGGTGTTC AACGTTGGGA AACTCGTGGG GCCACCGATC
GGCGGCTGGC TGCTAGCGGC AACCGGACCT GCTTGGGCCT TGGGTATCGA TGCAGCCAGT
TATTTACTGC CCATCGCCAG CGTGATGTTT CTTCTGCAGC CAGATCGCAC AAGGGAAGTG
CGCAGCACCA ACGTAAAGAA TGCCAGTTTG AGCAGTGCTT GGCGACAGTG CGGCCCCACC
TTGCAAGGCG TGCTCACGCT CACAGCGGTG ATGTGTTTGG TGGGATTTTT CCATCCCGGA
CTGGCCCCGC TGATTGCTTT TGAAGTGCTT GGAGGGAAAC CCACGGACCT TGGCCTGTTC
ACCAGCGTGC TGGCTGCAGG CAGCATTGCT GGTGGGGTGG TGCTGCAACG CAACAGCGTC
CAATTCAGCC ATCGACCTTT CCTCACCCTC GGAGGGTTTG GAATGATTAC GGCCATTGCC
CAACTGGGCA TGTCCAGAAG TCCTGGGGTG GCATTCAGCT TGGCTATGGC CTTTCTGATC
GGGGCCGGCA CCGCAGGCCT CTTGAGCAGC TGCAACCTAA TCACTCAAAT CGGGTCTGAT
CCAGTCATGC GGGGGCGCAT GGCCGGACTC AGCCAAATCG CCTTTCTCGG CGGGGGTGGG
ATCAGTGGCC TCTTGGTGGC AGGAGTGGTT GTAGCAACCA ATCTTTCAAC AGCCTTTGCC
CTATGCGGAG GAATCAGCCT TGTGGTGGCG ATTCGTTGGA TCCTGACCCG CGGCCAGAAA
ACACTCGAAC CGATCAGATC AACTTGA
 
Protein sequence
MTVLQLQPEQ QRRLFLVASG VSTAGSFAGI TAKGWILMDG SADPFLLALN FAALALPTLI 
ISGPAGVRTD RVGCERVLVQ SQWALLAAAG LGALAIPLFE GMAQVVLLLS STLLVGIAGA
YELTARNKYC SILVGPNQLG SYLTSFSVVF NVGKLVGPPI GGWLLAATGP AWALGIDAAS
YLLPIASVMF LLQPDRTREV RSTNVKNASL SSAWRQCGPT LQGVLTLTAV MCLVGFFHPG
LAPLIAFEVL GGKPTDLGLF TSVLAAGSIA GGVVLQRNSV QFSHRPFLTL GGFGMITAIA
QLGMSRSPGV AFSLAMAFLI GAGTAGLLSS CNLITQIGSD PVMRGRMAGL SQIAFLGGGG
ISGLLVAGVV VATNLSTAFA LCGGISLVVA IRWILTRGQK TLEPIRST