Gene Syncc9902_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0320 
Symbol 
ID3744133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp330720 
End bp332117 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content56% 
IMG OID637770488 
Producthypothetical protein 
Protein accessionYP_376336 
Protein GI78183901 
COG category[S] Function unknown 
COG ID[COG3463] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.935671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAGTGC GATTGACACC CCATCGCAGC ACTCCAACAG CACTTTGGTG GTGTTCCGCA 
GTCCTGGGCT TATTGGGTTG GGGTTGTTCT GCACTGCGCC ATCACCTACT TCAGAGCAAT
GCCTATGACC TTGGTCTTTT TGATCAATGG GCCTGGCTGA TTGGGCGTGG ACTCGAGCCT
GTGTCGTCCA TGGAACACGT GCATGTGTTA GCTGACCATG GCGCTTGGCT GCTTTATGGA
GCTGGGGCGG CCTATGGCCT TCTGCCGGGC GTGCATTGGC TCTTCGCCTC ACAAGCCATC
GCCCTGAGTT TCACCGCAAT TCCAATCTGG TGGCTCGGCC AGCAAGCGGG ACTCTCACCA
AAACACTGTT GGCTCGCTTG TGCACTTTGG TGGCTGCAAC CGGTTGTGTT CAACACAATC
TTGTTTGATT TCCACCCTGA AACATGGGTC ATGCCCGCTT TTGCCCTTGC GCTTTGGGCT
GAACGCGCCG AAAAACCACG GCTCTGGTTC GCCCTACTCC TACTCATGCT GGGCGCCCGA
GACGGTCTCA TCCTGGTGAT CGCCGGTATG GCCCTTGACT TGGGATGGCG TCAACGCTGG
CGCTGGTGCG CAGCTGCAGG GGGACTATCC ACCGGATGGC TTTTCATCCT GAGCCAAAGG
CTTTATCCCT TGCTCCGAGG TGGGAGCGGC CCGAAGGCTG CCGAACGCAT GTTCGGACAT
CTCGGCGATG GATTTTTAAG CCTTCTCAGC AGCCTTGAAT GGGGAGAAAT CGCCTTCTAT
CTGCTGATTC TCAGCCTGCC ATTGGGCTGG CTATGGCGCC GGTCGTCACG ATCAACCTTG
CTGATCGGAA GTCCACTTCT ACTGGTGAAT CTGCTCTCAG CATCGGCAAG TTATCGCACC
TTGGTGCACC ACTACAGCTT GCCCTTGGCC CTAATTGCTG TAGTAGCAGC CATCCGAGGA
GGGCTCCAAT CACCTTCTCG TCGCGGTATT CCGACTTGGG GCTTGATTTG GGCCACAGCC
TGCTGGCTCG CCCTGGCAAA ACCTTGGTTT TTCACCGGTC CATATCTTGA GCGGCAATCT
GATCTTGAAG ACGTCAGAGA TGCCATTGCA CTGATCAAAC CAAACGATTC CGTACTAACC
ACCAGTTACT TGGTTCCCCA GCTCAGCCAA CGCTCAACCA TCGCATTTCC AAAACGATCC
TCCCGAGGCC CTCTCGCCGA AACGAGCTGG TCGGTTCTAC TCCTGAATCC AAAAGACCCG
GGCTGGGGAT CATCGGCGCG GGTGCAACGA TCACTCCTTG ACCAAGCCCA AGCCAATGGA
TGGAGCTGCC AACACTGGCC CTCAAGCCTC AGCATCTGCC AAAAAGTTGA GACTGAGCCA
AACATCTCCA AACGATGA
 
Protein sequence
MAVRLTPHRS TPTALWWCSA VLGLLGWGCS ALRHHLLQSN AYDLGLFDQW AWLIGRGLEP 
VSSMEHVHVL ADHGAWLLYG AGAAYGLLPG VHWLFASQAI ALSFTAIPIW WLGQQAGLSP
KHCWLACALW WLQPVVFNTI LFDFHPETWV MPAFALALWA ERAEKPRLWF ALLLLMLGAR
DGLILVIAGM ALDLGWRQRW RWCAAAGGLS TGWLFILSQR LYPLLRGGSG PKAAERMFGH
LGDGFLSLLS SLEWGEIAFY LLILSLPLGW LWRRSSRSTL LIGSPLLLVN LLSASASYRT
LVHHYSLPLA LIAVVAAIRG GLQSPSRRGI PTWGLIWATA CWLALAKPWF FTGPYLERQS
DLEDVRDAIA LIKPNDSVLT TSYLVPQLSQ RSTIAFPKRS SRGPLAETSW SVLLLNPKDP
GWGSSARVQR SLLDQAQANG WSCQHWPSSL SICQKVETEP NISKR