Gene Syncc9902_0310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0310 
Symbol 
ID3743545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp321023 
End bp321586 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content52% 
IMG OID637770478 
Productphotosystem I assembly protein Ycf3 
Protein accessionYP_376326 
Protein GI78183892 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGGCC CGTCAGGATG GAGTGACATC AACCGGCGCG CCGTGCCCCG CAGCAACCGC 
AACGACAACT TCATCGACAA AAGCTTCACG GTGATGGCGG ACTTAATCGT CAAACTGCTG
CCGATTAATG CCCGTTCGAA AGAGGCCTAC GTCTATTACC GCGACGGACT ATCCGCCCAA
AATGATGGCG ACTACGCCGA AGCACTCGAA AACTACGACG AGGCCCTAAA GCTTGAAACA
GACCCCACCG ACCGCGGTGA AACCCTCAAG AACATGGCGA TTATTTACAT GTCGAACGGT
GAGGAGGAAC GGGCGATCGA GACGTACCAA AAAGCTTTAG ATGAAAACCC AAAACAACCC
TCATGCCTCA AAAACATGGG ACTGATCTTT GAAAAATGGG GCCGAATCGC TGAAGAAAGT
GGTCAACAAG ATGATGCAGA TCGCTGGTTT GACCAGGCTG CAGACGTCTG GACTCAAGCG
GTACGTCTCA ATCCAGGCGG TTACCTCGAT ATCGAAAATT GGTTGAAATC CACCGGTCGC
AGCAATGTCG ACGTGTACTT CTAG
 
Protein sequence
MTGPSGWSDI NRRAVPRSNR NDNFIDKSFT VMADLIVKLL PINARSKEAY VYYRDGLSAQ 
NDGDYAEALE NYDEALKLET DPTDRGETLK NMAIIYMSNG EEERAIETYQ KALDENPKQP
SCLKNMGLIF EKWGRIAEES GQQDDADRWF DQAADVWTQA VRLNPGGYLD IENWLKSTGR
SNVDVYF