Gene Syncc9902_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0300 
Symbol 
ID3743535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp311740 
End bp312177 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content55% 
IMG OID637770467 
ProductRNA-binding region RNP-1 
Protein accessionYP_376316 
Protein GI78183882 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCC GCCTTTACAT CGGCAATTTG CCGCAAACCT TTGAAGAACA GGAGCTTGCG 
GCTCTTTTGA AAGGCATTGG AGAAGGGATC CGGTTTAAGT CGGTGCTTGA TCGAGACACC
GGAAGCTGCC GTGGTTTTGG CTTCGCCAAC GTTGACGACC CCAAGGTTGC CGATGCAGTG
ATCGAGCAAC TCAATGGAAA GGAGTTTGGC GGCAGCACCC TTCGTGTTGA GCGTTCCGAA
CGCCGCGAAT CTGGTGGCAA TAACCGTCGT GGCGGAGCTC CCGCTCCCAT GGGTGCAGGG
CAACCTCAAG TGGCACGGAA AACCGTTAAC AAGGTGGTTC ACAGCGATGC TCCTGGAGAA
GGCGCACCCG ACCCACGCTG GGCCGGAGAA CTCTCCAAGT TGAAAGATTT ACTTGGCAAT
CAGAAAACAG CCGTTTGA
 
Protein sequence
MSIRLYIGNL PQTFEEQELA ALLKGIGEGI RFKSVLDRDT GSCRGFGFAN VDDPKVADAV 
IEQLNGKEFG GSTLRVERSE RRESGGNNRR GGAPAPMGAG QPQVARKTVN KVVHSDAPGE
GAPDPRWAGE LSKLKDLLGN QKTAV