Gene Syncc9902_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0269 
Symbol 
ID3742314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp282414 
End bp283538 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content61% 
IMG OID637770436 
Producthistidine kinase 
Protein accessionYP_376285 
Protein GI78183851 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTAA CTGATCGGTT CCTCGACTTT GCAGACCAGC AGCTGACTCC TGTGGTGTCG 
CTCATGGGTT TTACCCACCT CGGGCTGTAC CTAAGCGCGC CACCAGGCCA AGAAGGACCT
CCGCTGATCC TGATCAAGCA ATGGTCGTCA ACGAACCGTG CCTTACCCGC CGCAGATGTG
GATCCAGAGC TCAGGCAAGC CAGTGAAGAG CGCCGCTGGT ACCCGCTTCA GGATGCTGGG
TTGATTCTTG GTGCCCTGCG CGTCGAACTC GAGCCAGGCC TCAGCTGGAC CGCAGACCTC
GAAGAAGAGA TGCGGCGATG CGCCTTAGCG ATTAGCCACG CCCTCGGACG CGATCTGGAG
TGCATTCAGC TGCAGGAGGA GCTCCACCAG CAACGCAATC AGCTCAAAAC CCTGGTGCAT
CAGCTCCGCA ACCCCCTAGC GGCTCTGCGC ACCTATGCCC AGCTGATGAT GCGCCGCCTG
GAACCGGATA GCGCCCATCT CTCCCTCGTC GATGGAATCC TGACGGAGCA GCATCAACTG
GGGCGTTACA TCGATGCGCT CGAAAACCTA GGGCGACAAA GCCTCCCGAA TGGTCCTGAT
CCTTCAACGG CTTACTTGCT CCCTCCTGGC GCTGCTCCAC AGCGGGAAAG CCTGAAGGAA
CTCCTGCTTC CCCTCATCGA GCGGGCCAGC GCAACAGCCA GCCTTCAGGG CCGTCCCTGG
CATGGCCCCT CGCAGTGGCC TGCATGGAGC ACCCACTCCG CTGGAGATGG CAGCACAGCT
GAGATCGTTG CCAACCTGCT CGAGAACGCC TTCCGCTACA GCCCGCCAGG ACGTGCCATT
GGCCTCGCGT TACTTCCCGA TGGTCTTTGC GTTTGGGATG ACGGCCCGCC AATTTCAAGC
GAAGAACGAG AGCTGATTTT CCACCGCGGC GAACGGGGCA CCAGCAGCCG CGATCGACCT
GGCACCGGCC TTGGATTGGC CCTGGCTCGA GCCTTGGCTG AGCGCAATGG TGGCCATCTC
ACCCTGAGCG TTGAGCCATG GCGGATCCAA ACCAACCTGC CGGCACAGGG CAATGCATTT
CAACTCAGTT GGCCGCAGCC AGCCCTGCCA GCAGCAACAG CGTGA
 
Protein sequence
MQLTDRFLDF ADQQLTPVVS LMGFTHLGLY LSAPPGQEGP PLILIKQWSS TNRALPAADV 
DPELRQASEE RRWYPLQDAG LILGALRVEL EPGLSWTADL EEEMRRCALA ISHALGRDLE
CIQLQEELHQ QRNQLKTLVH QLRNPLAALR TYAQLMMRRL EPDSAHLSLV DGILTEQHQL
GRYIDALENL GRQSLPNGPD PSTAYLLPPG AAPQRESLKE LLLPLIERAS ATASLQGRPW
HGPSQWPAWS THSAGDGSTA EIVANLLENA FRYSPPGRAI GLALLPDGLC VWDDGPPISS
EERELIFHRG ERGTSSRDRP GTGLGLALAR ALAERNGGHL TLSVEPWRIQ TNLPAQGNAF
QLSWPQPALP AATA