Gene Syncc9902_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0235 
Symbol 
ID3744129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp247526 
End bp248386 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content57% 
IMG OID637770404 
ProductABC transporter 
Protein accessionYP_376253 
Protein GI78183819 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACGCA GTGTGCGTGA TGCCATCGTC GGATTCACTG TCCTGGGTGG CCTGGTGGGT 
TTTGCTGCCA CGGGGATGTG GATGCGTGGC ATTCGATTGG GCTCGAGCGA GTGGAGACTG
ACGGCGAATT TCAATGATGC GTCAGGACTG GCCGAGCGTT CGCCGGTGAC CTACCGCGGC
ATTTTGGTTG GCTCGGTGCG CTCGATCAAA GTCACCTCGA GTGCGGTGGT TGCAGAGTTG
GAAATCACCA AGGGTGACCT GCGTCTGCCC TTACCGGTCA CAGCCACCAT CGGCTCAGCG
TCGTTGCTTG GAGGCGATGC TCAGGTTTCA TTGATGAGTC GTGGCAAGCC CTTGCCAGAG
AATGCGCCGT TGCCGAAAGC CGTTACTTGC CAGCCAAAAG CTCAGTTGTG TGACGGCGCC
ACGGTGATGG GCCAGGAAGC CTCAAGCATC ACAACGGTGA CCGAAACCCT TCAGGAGTTG
TTGACACAAG CCAAAGCTGA GAAGTTGATC CCGAATGCGG CGGCTTCGAT GGAGCAGATC
GATGAAACCG CAAAGTCCTT TGAAGCCCTG ACGGTTCAGC TGCAAGCAGA GTTATTAAAA
GTGGATCCGG TATTGCGCAA TCTCCAAGCA GCGACGGCCC ACGCCAACAA CATTGTGGCT
TCGTTGGATA ACCCAGAAAC CTTGACGAGC TTGCAACAGA CGGCGACAAA TGCGGCAGAG
CTCACCGCCA AATTGGATGC CGTGGGAGGT GACGTAGAAA CTCTTACGTC CGATCCAGCG
TTTATGGACG GCCTGCGGAA TGTGACTATT GGCCTTGGAG CTCTGTTCTC AGAGGTGTAC
CCCGCCCAAA CAAGCCGGTA A
 
Protein sequence
MRRSVRDAIV GFTVLGGLVG FAATGMWMRG IRLGSSEWRL TANFNDASGL AERSPVTYRG 
ILVGSVRSIK VTSSAVVAEL EITKGDLRLP LPVTATIGSA SLLGGDAQVS LMSRGKPLPE
NAPLPKAVTC QPKAQLCDGA TVMGQEASSI TTVTETLQEL LTQAKAEKLI PNAAASMEQI
DETAKSFEAL TVQLQAELLK VDPVLRNLQA ATAHANNIVA SLDNPETLTS LQQTATNAAE
LTAKLDAVGG DVETLTSDPA FMDGLRNVTI GLGALFSEVY PAQTSR