Gene Syncc9902_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0231 
Symbol 
ID3744125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp243916 
End bp244650 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content55% 
IMG OID637770400 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_376249 
Protein GI78183815 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAT CACCATCGAT TTCCGCCGTT CGCGACCTGC GGGAGGCCAC TTGCGGCCCC 
ATCGGTACCC CTGAGGTAAC CAACGAGCTG AGTGAAAACA TCATTCTCAC CAGCCTTGAT
GATCTCCACA ATTGGGCACG ACTCAGCAGT CTTTGGCCAC TGCTTTACGG CACTGCCTGT
TGCTTCATCG AGTTTGCAGC GCTGCTTGGC TCACGTTTCG ATTTCGATCG ATTCGGTTTG
GTGCCGCGCA GTTCACCCCG TCAGGCGGAT CTACTCATCG TGGCTGGCAC AGTCACCATG
AAAATGGCTC CTGCTTTGGT CCGTCTCTAC GAACAGATGC CTGAGCCGAA GTATGTGATT
GCCATGGGTG CATGCACAAT TACCGGCGGC ATGTTCAGCG CTGATTCCAC GACGGCCGTC
CGCGGCGTTG ACAAGTTGAT TCCTGTGGAC TTGTACCTCC CTGGATGTCC TCCACGGCCG
GAAGCCATTT TTGATGCAGT AATCAAGTTG CGCAAAAAGG TTGGCGATGA GTCTCTGGCT
GAGCGCAGCA AGCACCAGCA GACCCATCGT TATTTCACGA TGACTCACCA AATGAAAGCG
GTGGAACCTC AAGTCACCGG TGCATATTTG CGCGCTGAAA GTCAACAAGC AGCTTTGGCG
GCAGCCCCTG CTGGACAAAC ATTGGCGACG GATGCCGCCG TTTTGAATCC CGCTCCTGAA
ATGGTTCAGC CATGA
 
Protein sequence
MPESPSISAV RDLREATCGP IGTPEVTNEL SENIILTSLD DLHNWARLSS LWPLLYGTAC 
CFIEFAALLG SRFDFDRFGL VPRSSPRQAD LLIVAGTVTM KMAPALVRLY EQMPEPKYVI
AMGACTITGG MFSADSTTAV RGVDKLIPVD LYLPGCPPRP EAIFDAVIKL RKKVGDESLA
ERSKHQQTHR YFTMTHQMKA VEPQVTGAYL RAESQQAALA AAPAGQTLAT DAAVLNPAPE
MVQP