| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0228 |
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| Symbol | |
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| ID | 3744122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 241986 |
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| End bp | 242987 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637770397 |
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| Product | Ycf48-like protein |
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| Protein accession | YP_376246 |
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| Protein GI | 78183812 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGAC TGCTGTCATC CGCCGTCAAT CTTTTACTGG TGCTCGTGCT CGGCGTAGGC
CTGAGTGGAT GCGTTTCGAC GCGCGTCCCA ACGGCCAGTT CCAGCCCTTG GAAAGCGATC
GACCTGGAAA CCCAGGCGAA TCCCTTGGAT GTGTCGTTCA CCGATCCCAG CCATGGCTTC
CTGGTGGGCA GCAACCGGAT GATTCGAGAA ACCGATGATG GCGGTGCCCA TTGGAACGAT
CGCAGTCTCG ATTTACCCGA CGAAGAAAAT TTCAGGCTGA TCAGCATCGA TTTCGAGGGC
CAAGAAGGCT GGATTGCCGG ACAACCAGGC CTGCTAATGC ACAGCACCGA CGGTGGCCAA
AATTGGACCC GTCTTTTCCT GGATACCAAG CTCCCTGGCG AGCCCTACCT GATCACCGCC
CTAGGCAAAA GCTCTGCCGA GCTCGCAACA AATGTTGGAG CTGTATACAA AACCAATGAT
GGTGGTGAGA GTTGGGAAGC CAGCGTGACC GACGCAGCTG GCGCGGTGCG TGATCTACGC
CGAAGCAGCA ATGGCAGCTA CGTCAGTGTG AGTGGTCTTG GCAATTTCTA TGCCACCTGG
GAACCAGGAG AAACGGTTTG GAAAGTTCAT CAGCGGGTGA GCAGCCAACG CCTGCAGAGC
ATCGGCTATC AACCTGATGG CAATCTTTGG ATGGTCGCCC GCGGCGCTCA AATTCGTCTC
AACGATGGCG ACGGCAACGT TGAAGACTGG AGCAAAGCGA TTATCCCGAT CACAAATGGC
TATGGCTACA TGGACATGGC TTGGGATGAC GATGGTGGCA TTTGGGCCGG CGGTGGCAAT
GGCACTCTCC TGGTAAGCCA TGACGGTGGC GATAGCTGGG AAACCGATCC CGTTGGCGAT
CAGCAACCGA GCAACTTCAC ACGCTTCGTC TTTGACGACG ACCATGCCTT CGTTTTGGGA
GAGCGGGGCA ATCTGCTGCG CTGGGTCGGC AACGCTGTGT AA
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| Protein sequence | MNRLLSSAVN LLLVLVLGVG LSGCVSTRVP TASSSPWKAI DLETQANPLD VSFTDPSHGF
LVGSNRMIRE TDDGGAHWND RSLDLPDEEN FRLISIDFEG QEGWIAGQPG LLMHSTDGGQ
NWTRLFLDTK LPGEPYLITA LGKSSAELAT NVGAVYKTND GGESWEASVT DAAGAVRDLR
RSSNGSYVSV SGLGNFYATW EPGETVWKVH QRVSSQRLQS IGYQPDGNLW MVARGAQIRL
NDGDGNVEDW SKAIIPITNG YGYMDMAWDD DGGIWAGGGN GTLLVSHDGG DSWETDPVGD
QQPSNFTRFV FDDDHAFVLG ERGNLLRWVG NAV
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