Gene Syncc9902_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0213 
Symbol 
ID3743023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp225613 
End bp227052 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content59% 
IMG OID637770382 
Producthypothetical protein 
Protein accessionYP_376231 
Protein GI78183797 
COG category[S] Function unknown 
COG ID[COG5305] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGGT CCCGTTCGGC TTCGATCGTC CTGGTCGTGG CTTTGGTGTG TGCAGGATTT 
GCCTTGAAGG CTCTCTGGCT CATCGATGCC ACGGCGCTCT GGAGCGACGA GTTGTACAGC
GTGGGTAAGA GTTTTCAAGC CAGTCCGGCG GCTTTGCTTT CAATGCTTCG CCACGACACC
CATCCACCTC TTTATTACGC CGTGCTTTGG GGATGGGGCC AGCTGGTGGG GCAAAGCCCG
ATCACCCTGC GGTTGCTCTC ATGGCTCGCC TACGGCGCGG GTGGGGTTGT GATGGTGGCC
CAGGCAAGGG CCTTGGCTGT GCACAAGCGT CTGGGCTGGA CCGTCTCATT GGCGGCGCTG
ATGGCGTTTT GTAGCCCCTA TCCCATCCGT TTTTCGATTG AAGGCAAGAG CTATGCCCTG
CTGGTGTTGT TTGTGGCTTT GGCTTGGTGG TGGCGCAACC AAGGCCGTCT TGTCCCCTAT
GCCTTAGCGG TGGCCCTGGC TTCACTAACT CATTTTTATG GTCTCTTTTT GCTGGTGGCT
GCTGGGGCTT GGGACGGCTC GCGCCGTCGC TGGGGATTGT GCTTGGCTGC TGGCCTGGGG
GTAATCCCAG CCCTGGCTTG GATCGCCTAC GCCTCCGACT ATCTCTTCAG CTCGAAGGCC
GGCAGCTGGA TTGGCGGCCC AAGCTTTGCG TTGTTGGAGG ACACCTTGGC TCGAGGGCTT
GGCGTTTGGC CCCTGCCCAA GTTGGCCCTG CTGCTACTCA CGCTTGTAAT CCTGCGTCGT
TGGGGTGGTC TGAAGCCAGT GCGCTGGCTC GATGTTGATC TGTTGGATCG CACTGGTGTG
ATCCCATCGG GCTTGATGGT GGTTGGGGTG GTGCTGATCT CTTTCTTCAA GCCCCTCGCC
TTTGGTCGTT ATTTCGTTGT GCTGATTCCG GCTCTTGTGC CTGTCTTGGC AGTTCTGCTT
GGAGATGCTC AGTTGAATCG CGGGGGGCGC TTGTTCGCTG GCGTTGTTTT GATGATGGTG
ATCGGCAGCT GGTGGGGGCC AGGGTTTGCT GAGCTCGACT CGGGATTGGG CGGAGTGCGC
GAACAGGATC AGTTTCGAAT GGTGAGCCGG TATACGGATG GATTGGTTGA GCGATATAGC
CCTCGAGCGC GCCTGCTCAA CCTCAGTGAT CGGATGGAGC AATCGATGGG GCGAATGGCT
CCTCCCGTCG CTGCATGGGG AGATCGCAGT GCCTTGCATC AACGGTTGTC GATCACCCCA
CATCCCTCCG TGATTTGGTT GGCCAGTAGT GGGCCCGAAC AGGCGCTTTT CCGCAAACTG
AACCCATTGC ACGAAGAGGT TGAGCAGCTG GGCTATCGCT GCGTTGACCG TTCACAAGGT
CTTAGCCATG GCCGGATCCT GCAATGCCAA CTTGAATCCA AGCTGAATCC TGTGCCATAA
 
Protein sequence
MIGSRSASIV LVVALVCAGF ALKALWLIDA TALWSDELYS VGKSFQASPA ALLSMLRHDT 
HPPLYYAVLW GWGQLVGQSP ITLRLLSWLA YGAGGVVMVA QARALAVHKR LGWTVSLAAL
MAFCSPYPIR FSIEGKSYAL LVLFVALAWW WRNQGRLVPY ALAVALASLT HFYGLFLLVA
AGAWDGSRRR WGLCLAAGLG VIPALAWIAY ASDYLFSSKA GSWIGGPSFA LLEDTLARGL
GVWPLPKLAL LLLTLVILRR WGGLKPVRWL DVDLLDRTGV IPSGLMVVGV VLISFFKPLA
FGRYFVVLIP ALVPVLAVLL GDAQLNRGGR LFAGVVLMMV IGSWWGPGFA ELDSGLGGVR
EQDQFRMVSR YTDGLVERYS PRARLLNLSD RMEQSMGRMA PPVAAWGDRS ALHQRLSITP
HPSVIWLASS GPEQALFRKL NPLHEEVEQL GYRCVDRSQG LSHGRILQCQ LESKLNPVP