| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0114 |
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| Symbol | |
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| ID | 3744028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 117037 |
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| End bp | 119211 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637770280 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_376132 |
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| Protein GI | 78183698 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.029745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGATA GAATTCAAAA GAGAGAGAGG GGATGGACGC ACCATAGGAA AAACGAATTA
ATAAAGGCAG AAAAAATTTA TTTGGAACTT ATAGAAGAGA GAGCTCAGGA GGAAGATATA
GCAAATCTTG GGGCATTACT AAGAAGTCAA GGGAGAATAA AAGAAGCGAT GAAGTTGTAT
AAGACATGGT GGGGAAGAGT CGAGATAACA CCTAATATCT GCTTAAATGC AGTAAATGCA
GCAATAGAAA TTAATAGTTT GAAAGAAGCA AATAAATGGC TAATAGAGAC TTCAGAGATA
TATAGCAATG ATATCAGGTT AACAGAAGCT AAGGCAAGGC TATACCAAGC AATGGAGAAA
AAAGTTGAAG CAATAGAATT ACTAAAAGAA CTCACATCAC AAAAGGATGC AAAAGCAAAT
ACATGGATTG AACTAGGTAG AGCCTATAAC AGCAATGGTG AAATAGATGA AGCATTAGTT
AGTTTTAGAA CAGCAAAAGA AATAAATAAC AAGGACCCAA GACCAACCGC AAATATAATT
ACAATACTAA GCGAGAAAGG AAGATTTAAG GAGGCAAATA AGGAAGTAGA AAAAACGGAA
TGTAATCTAA AGGAGGAATT AGCAATAAAG GGAGCAATAG CATATTTAAA ACTAAAAGAA
GAAAAAATAT ACGAAGCAGC AATAGACTAT GCAGAATTAT GCAGAATTGA TCCACTTCAA
CCAATATACT GGCTAAATTG GTGCGCTTGC AAAAGAAAGT TAAAGCGAAA TATAGAAGCA
TTACAGATAT CAAAGAAAGG ATTGTCGATT AATCCATCTA ATGACAATCT AAGACATGCA
ATGAGTCAAT GTTTAGCAGA AACAGGGAAC CCAGAGTTAG CAATTAAAGT AATGCGAGAA
GAAATAGAAG GAGAAAAAAA GATATCGGAG CAAAATTTGT ATAACTTACA GTTTATAGGA
GAAGGGTATC AAATAATTGA CAGCGAAAAA CTCAAGTGTA TGGCAGAAGA TTGGGAAAGT
ATAAAAATCA AAAAGAGAAT AGGACCCTTG TGGGGTGACA GGATAGAGGA TAAAGATAAA
GAAAGGATAA ATGTAGGATA TATGTCAGCA GATTTCTGCG ATCATCCTGT AGGAAGATTC
ATAAAACCAA TAATAAAAGA ACATGATAGA AAAAGAGTAA AAGTAATTGG TATAGACTGT
GGTTCAAGAA AAGATGCAAA TAATAGAGAA ATAAAAGAAA TGTGCAATGG ATGGATAGAT
GTCAACAATT TATCAGACCA AGAAGCAGCA AGGAAAATTG CAAATCATGG AATAGATGTT
TTAATTGAAT TAGGAGGATA CACTGCAGAA AACAGATTAG GGATATTAAT AGAGAAACCA
GGAAAAATTC AATTGAGTTA TTTAGGCTAT TTTGCACCTA CGTATCTAAA ATCTATCGAT
GGTTGGATAG GTGACGATAT ACTTTTTGAA TCGTTAAACA AGACACAAAG AGATGTGCAC
AAGCTATACA AAATAAGAGA TGGATATATG GCAATGGAAC TAAAGACAGA GGCGGTAATC
AAAAACACGC CATTAAATAG GAAATTTAGA TTTGGATGCT TCAATCACTC GAGAAAACTA
ACATACGAAA CAATCAGGCT ATTCGCGAAG GTGATGAAAG AAAATCCAGA ATCTGAGATT
GCACTAAAAA GCATAAGTTT CAGTGAAACA GAAGAACAAG AAAGAATCAT AAATTTGCTA
AATAAAAATG GAATATCAAA AAAAAGAGTT ATACTAATGC CTTATATAAC AGACAAAATA
AAGCATCAAG AAAAGTATAA CGAAATAGAT GTAGCACTAG ATCCTATACC TTATGGAGGT
GCAACCACCA CATGTGAAGC ACTGGAGATG GGAGTTCCGG TAATAACTTT GAAAGGTGAA
GGGATGGTTG GAAGACTAAG TTCGAGTATT TTAAAATACG GACGTTGTGA AGAGTGGATT
GGGAATAACG AAACAGAATA TATAAATATA AGCGTAAAAT TAAGAAAAGA GGGTAAAAGA
GATGAGAAAA AAAGGATTCA ACTAAAAGCC AAACTTAGTA AAACAGATCT AACAAACCAG
AAAAGACTAT CAAAACAACT TGAGGAGGCT TATCTAGAAG CCTTGACCAT TTTTGAAAAG
GCTAATTCGA TATGA
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| Protein sequence | MEDRIQKRER GWTHHRKNEL IKAEKIYLEL IEERAQEEDI ANLGALLRSQ GRIKEAMKLY
KTWWGRVEIT PNICLNAVNA AIEINSLKEA NKWLIETSEI YSNDIRLTEA KARLYQAMEK
KVEAIELLKE LTSQKDAKAN TWIELGRAYN SNGEIDEALV SFRTAKEINN KDPRPTANII
TILSEKGRFK EANKEVEKTE CNLKEELAIK GAIAYLKLKE EKIYEAAIDY AELCRIDPLQ
PIYWLNWCAC KRKLKRNIEA LQISKKGLSI NPSNDNLRHA MSQCLAETGN PELAIKVMRE
EIEGEKKISE QNLYNLQFIG EGYQIIDSEK LKCMAEDWES IKIKKRIGPL WGDRIEDKDK
ERINVGYMSA DFCDHPVGRF IKPIIKEHDR KRVKVIGIDC GSRKDANNRE IKEMCNGWID
VNNLSDQEAA RKIANHGIDV LIELGGYTAE NRLGILIEKP GKIQLSYLGY FAPTYLKSID
GWIGDDILFE SLNKTQRDVH KLYKIRDGYM AMELKTEAVI KNTPLNRKFR FGCFNHSRKL
TYETIRLFAK VMKENPESEI ALKSISFSET EEQERIINLL NKNGISKKRV ILMPYITDKI
KHQEKYNEID VALDPIPYGG ATTTCEALEM GVPVITLKGE GMVGRLSSSI LKYGRCEEWI
GNNETEYINI SVKLRKEGKR DEKKRIQLKA KLSKTDLTNQ KRLSKQLEEA YLEALTIFEK
ANSI
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